Analysis of interatomic Contacts of Structural Units in PDB entry:
9TEQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TEQ entry

There are 5 chains in PDB entry 9TEQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 592
E
 C 3 T 30
F
 A 31 G 58
I
 ASP 23ASN 239
B
 MET 1GLU 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 9TEQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 45Right-handed alpha
Helix 2
AA2
A
68 80Right-handed alpha
Helix 3
AA3
A
90 95Right-handed 310
Helix 4
AA4
A
99 101Right-handed 310
Helix 5
AA5
A
102 112Right-handed alpha
Helix 6
AA6
A
125 127Right-handed 310
Helix 7
AA7
A
128 141Right-handed alpha
Helix 8
AA8
A
144 163Right-handed alpha
Helix 9
AA9
A
211 226Right-handed alpha
Helix 10
AB1
A
243 255Right-handed alpha
Helix 11
AB2
A
258 264Right-handed alpha
Helix 12
AB3
A
273 282Right-handed alpha
Helix 13
AB4
A
283 288Right-handed 310
Helix 14
AB5
A
331 345Right-handed alpha
Helix 15
AB6
A
379 382Right-handed 310
Helix 16
AB7
A
409 426Right-handed alpha
Helix 17
AB8
A
430 444Right-handed alpha
Helix 18
AB9
A
450 481Right-handed alpha
Helix 19
AC1
A
484 516Right-handed alpha
Helix 20
AC2
A
540 545Right-handed alpha
Helix 21
AC3
A
546 557Right-handed alpha
Helix 22
AC4
I
56 68Right-handed alpha
Helix 23
AC5
I
127 131Right-handed 310
Helix 24
AC6
I
140 150Right-handed alpha
Helix 25
AC7
I
167 170Right-handed 310
Helix 26
AC8
I
179 198Right-handed alpha
Helix 27
AC9
I
217 221Right-handed 310
Helix 28
AD1
B
22 45Right-handed alpha
Helix 29
AD2
B
68 80Right-handed alpha
Helix 30
AD3
B
90 95Right-handed 310
Helix 31
AD4
B
98 100Right-handed 310
Helix 32
AD5
B
101 112Right-handed alpha
Helix 33
AD6
B
125 127Right-handed 310
Helix 34
AD7
B
128 145Right-handed alpha
Helix 35
AD8
B
462 481Right-handed alpha
Helix 36
AD9
B
485 507Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 9TEQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 55first strand
Strand 2
A
3 9parallel
Strand 3
A
85 88parallel
Strand 4
A
115 118parallel
Strand 5
A
122 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 186first strand
Strand 2
A
189 200anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 295first strand
Strand 2
A
307 312anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 366first strand
Strand 2
A
558 563parallel
Strand 3
A
580 584anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
384 387anti-parallel
Strand 3
A
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
71 73first strand
Strand 2
I
83 86anti-parallel
Strand 3
I
43 54anti-parallel
Strand 4
I
27 35anti-parallel
Strand 5
I
172 177parallel
Strand 6
I
158 164anti-parallel
Strand 7
I
101 103anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
71 73first strand
Strand 2
I
83 86anti-parallel
Strand 3
I
43 54anti-parallel
Strand 4
I
27 35anti-parallel
Strand 5
I
172 177parallel
Strand 6
I
158 164anti-parallel
Strand 7
I
91 96anti-parallel
Strand 8
I
202 213anti-parallel
Strand 9
I
225 237anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
105 109first strand
Strand 2
I
112 117anti-parallel
Strand 3
I
122 124anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 55first strand
Strand 2
B
3 9parallel
Strand 3
B
85 88parallel
Strand 4
B
115 118parallel
Strand 5
B
122 124anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il