Analysis of interatomic Contacts of Structural Units in PDB entry:
9TGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TGO entry

There are 16 chains in PDB entry 9TGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1SER 121
B
 ASP 1ILE 106
C
 LYS 1SER 121
E
 ASP 1ILE 106
O
 C 1 G 12
P
 C 1 G 12
D
 LYS 1SER 121
F
 ASP 1ILE 106
I
 LYS 1SER 121
J
 ASP 1ILE 106
K
 LYS 1SER 121
M
 ASP 1ILE 106
S
 C 1 G 12
T
 C 1 G 12
L
 LYS 1SER 121
N
 ASP 1ILE 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9TGO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
53 57Right-handed 310
Helix 3
AA3
B
79 83Right-handed 310
Helix 4
AA4
C
28 32Right-handed 310
Helix 5
AA5
C
53 57Right-handed 310
Helix 6
AA6
C
89 93Right-handed 310
Helix 7
AA7
E
79 83Right-handed 310
Helix 8
AA8
D
28 32Right-handed 310
Helix 9
AA9
D
89 93Right-handed 310
Helix 10
AB1
I
28 32Right-handed 310
Helix 11
AB2
I
53 57Right-handed 310
Helix 12
AB3
I
89 93Right-handed 310
Helix 13
AB4
J
79 83Right-handed 310
Helix 14
AB5
K
28 32Right-handed 310
Helix 15
AB6
K
53 57Right-handed 310
Helix 16
AB7
M
79 83Right-handed 310
Helix 17
AB8
L
28 32Right-handed 310
Helix 18
AB9
L
53 57Right-handed 310
Helix 19
AC1
L
89 93Right-handed 310
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There are 35 sheets in PDB entry 9TGO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
17 25anti-parallel
Strand 3
A
80 86anti-parallel
Strand 4
A
70 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
116 120parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
60 62anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
116 120parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
109 112anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
102 105parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
44 49anti-parallel
Strand 6
B
53 54anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
102 105parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
97 98anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 24first strand
Strand 2
B
70 75anti-parallel
Strand 3
B
62 67anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
17 25anti-parallel
Strand 3
C
80 86anti-parallel
Strand 4
C
70 75anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
116 120parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
34 39anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
60 62anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 5first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
70 75anti-parallel
Strand 4
E
62 67anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
102 105parallel
Strand 3
E
85 90anti-parallel
Strand 4
E
33 38anti-parallel
Strand 5
E
44 49anti-parallel
Strand 6
E
53 54anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
102 105parallel
Strand 3
E
85 90anti-parallel
Strand 4
E
97 98anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
17 25anti-parallel
Strand 3
D
80 86anti-parallel
Strand 4
D
70 75anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
116 120parallel
Strand 3
D
94 101anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
45 51anti-parallel
Strand 6
D
60 62anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
116 120parallel
Strand 3
D
94 101anti-parallel
Strand 4
D
109 112anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 5first strand
Strand 2
F
19 25anti-parallel
Strand 3
F
70 75anti-parallel
Strand 4
F
62 67anti-parallel
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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
102 105parallel
Strand 3
F
85 90anti-parallel
Strand 4
F
33 38anti-parallel
Strand 5
F
44 49anti-parallel
Strand 6
F
53 54anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
102 105parallel
Strand 3
F
85 90anti-parallel
Strand 4
F
97 98anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 7first strand
Strand 2
I
21 25anti-parallel
Strand 3
I
80 86anti-parallel
Strand 4
I
17 19anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 7first strand
Strand 2
I
21 25anti-parallel
Strand 3
I
80 86anti-parallel
Strand 4
I
70 75anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
11 12first strand
Strand 2
I
116 120parallel
Strand 3
I
94 100anti-parallel
Strand 4
I
34 39anti-parallel
Strand 5
I
47 51anti-parallel
Strand 6
I
60 62anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
4 5first strand
Strand 2
J
19 25anti-parallel
Strand 3
J
70 75anti-parallel
Strand 4
J
62 67anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
103 105parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
44 49first strand
Strand 2
J
34 38anti-parallel
Strand 3
J
85 87anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
3 7first strand
Strand 2
K
17 25anti-parallel
Strand 3
K
80 86anti-parallel
Strand 4
K
70 75anti-parallel
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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 12first strand
Strand 2
K
116 120parallel
Strand 3
K
94 101anti-parallel
Strand 4
K
34 39anti-parallel
Strand 5
K
45 51anti-parallel
Strand 6
K
60 62anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 12first strand
Strand 2
K
116 120parallel
Strand 3
K
94 101anti-parallel
Strand 4
K
109 111anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 12first strand
Strand 2
M
102 105parallel
Strand 3
M
85 87anti-parallel
Strand 4
M
34 38anti-parallel
Strand 5
M
44 49anti-parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
19 23first strand
Strand 2
M
71 75anti-parallel
Strand 3
M
62 65anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
89 90first strand
Strand 2
M
97 98anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
3 7first strand
Strand 2
L
17 25anti-parallel
Strand 3
L
80 86anti-parallel
Strand 4
L
70 75anti-parallel
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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 12first strand
Strand 2
L
116 120parallel
Strand 3
L
94 101anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
45 51anti-parallel
Strand 6
L
60 62anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 12first strand
Strand 2
L
116 120parallel
Strand 3
L
94 101anti-parallel
Strand 4
L
109 111anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
4 5first strand
Strand 2
N
19 25anti-parallel
Strand 3
N
70 75anti-parallel
Strand 4
N
62 67anti-parallel
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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 12first strand
Strand 2
N
102 105parallel
Strand 3
N
85 90anti-parallel
Strand 4
N
33 38anti-parallel
Strand 5
N
44 49anti-parallel
Strand 6
N
53 54anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 12first strand
Strand 2
N
102 105parallel
Strand 3
N
85 90anti-parallel
Strand 4
N
97 98anti-parallel
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