Analysis of interatomic Contacts of Structural Units in PDB entry:
9TIG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TIG entry

There are 6 chains in PDB entry 9TIG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 4	ASN 171
B	ASN 4	ASN 171
C	ALA 2	VAL 173
D	PHE 5	ASN 171
F	ALA 4	VAL 173
H	ASN 95	GLN 201

There are 23 helices in PDB entry 9TIG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	55	Right-handed alpha
Helix 2	AA2	A	120	124	Right-handed 310
Helix 3	AA3	B	8	12	Right-handed 310
Helix 4	AA4	B	15	18	Right-handed 310
Helix 5	AA5	B	32	53	Right-handed alpha
Helix 6	AA6	B	120	124	Right-handed 310
Helix 7	AA7	C	5	19	Right-handed alpha
Helix 8	AA8	C	20	22	Right-handed 310
Helix 9	AA9	C	89	91	Right-handed 310
Helix 10	AB1	C	92	97	Right-handed alpha
Helix 11	AB2	C	138	140	Right-handed 310
Helix 12	AB3	D	15	18	Right-handed 310
Helix 13	AB4	D	32	53	Right-handed alpha
Helix 14	AB5	D	120	124	Right-handed 310
Helix 15	AB6	F	5	19	Right-handed alpha
Helix 16	AB7	F	89	91	Right-handed 310
Helix 17	AB8	F	92	97	Right-handed alpha
Helix 18	AB9	F	138	140	Right-handed 310
Helix 19	AC1	H	96	106	Right-handed alpha
Helix 20	AC2	H	117	122	Right-handed 310
Helix 21	AC3	H	124	128	Right-handed 310
Helix 22	AC4	H	157	166	Right-handed alpha
Helix 23	AC5	H	179	181	Right-handed 310

There are 18 sheets in PDB entry 9TIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	25	first strand
Strand 2	B	138	149	anti-parallel
Strand 3	B	103	115	anti-parallel
Strand 4	B	155	161	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	63	first strand
Strand 2	A	79	83	anti-parallel
Strand 3	A	86	89	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	68	first strand
Strand 2	A	73	76	anti-parallel
Strand 3	A	95	97	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	104	first strand
Strand 2	A	160	161	anti-parallel
Strand 3	A	164	165	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	148	first strand
Strand 2	A	107	110	anti-parallel
Strand 3	A	155	156	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	139	142	anti-parallel
Strand 3	D	20	24	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	24	first strand
Strand 2	D	139	149	anti-parallel
Strand 3	D	103	115	anti-parallel
Strand 4	D	155	161	anti-parallel
Strand 5	D	164	166	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	79	83	anti-parallel
Strand 3	B	86	90	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	68	first strand
Strand 2	B	73	76	anti-parallel
Strand 3	B	95	97	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	F	147	157	anti-parallel
Strand 3	F	117	124	anti-parallel
Strand 4	F	24	28	anti-parallel
Strand 5	F	54	57	anti-parallel
Strand 6	F	136	137	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	137	first strand
Strand 2	C	54	57	anti-parallel
Strand 3	C	24	28	anti-parallel
Strand 4	C	115	124	anti-parallel
Strand 5	C	147	159	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	83	88	anti-parallel
Strand 3	C	63	67	anti-parallel
Strand 4	C	100	108	anti-parallel
Strand 5	C	164	171	anti-parallel
Strand 6	H	197	198	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	128	first strand
Strand 2	C	142	144	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	63	first strand
Strand 2	D	79	83	anti-parallel
Strand 3	D	86	90	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	75	first strand
Strand 2	D	95	97	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	80	first strand
Strand 2	F	83	88	anti-parallel
Strand 3	F	60	66	anti-parallel
Strand 4	F	100	108	anti-parallel
Strand 5	F	163	167	anti-parallel
Strand 6	H	171	177	parallel
Strand 7	H	145	150	parallel
Strand 8	H	113	116	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	80	first strand
Strand 2	F	83	88	anti-parallel
Strand 3	F	60	66	anti-parallel
Strand 4	F	100	108	anti-parallel
Strand 5	F	170	172	anti-parallel
Strand 6	H	188	189	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	127	128	first strand
Strand 2	F	142	144	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TIG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TIG