Analysis of interatomic Contacts of Structural Units in PDB entry:
9TKE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TKE entry

There are 5 chains in PDB entry 9TKE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8MET 92
B
 GLY 8MET 92
C
 GLY 8MET 92
D
 GLY 8MET 92
E
 GLY 8MET 92
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9TKE

There are 10 sheets in PDB entry 9TKE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
A
13 16parallel
Strand 3
C
13 16parallel
Strand 4
D
13 16parallel
Strand 5
E
13 16parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
A
26 27parallel
Strand 3
C
26 27parallel
Strand 4
D
26 27parallel
Strand 5
E
26 27parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
A
35 36parallel
Strand 3
C
35 36parallel
Strand 4
D
35 36parallel
Strand 5
E
35 36parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
A
39 42parallel
Strand 3
C
39 42parallel
Strand 4
D
39 42parallel
Strand 5
E
39 42parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 56first strand
Strand 2
A
45 56parallel
Strand 3
C
45 56parallel
Strand 4
D
45 56parallel
Strand 5
E
45 56parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
A
59 60parallel
Strand 3
C
59 60parallel
Strand 4
D
59 60parallel
Strand 5
E
59 60parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 67first strand
Strand 2
A
63 67parallel
Strand 3
C
63 67parallel
Strand 4
D
63 67parallel
Strand 5
E
63 67parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 80first strand
Strand 2
A
74 80parallel
Strand 3
C
74 80parallel
Strand 4
D
74 80parallel
Strand 5
E
74 80parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 85first strand
Strand 2
A
83 85parallel
Strand 3
C
83 85parallel
Strand 4
D
83 85parallel
Strand 5
E
83 85parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 91first strand
Strand 2
A
88 91parallel
Strand 3
C
88 91parallel
Strand 4
D
88 91parallel
Strand 5
E
88 91parallel
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