Analysis of interatomic Contacts of Structural Units in PDB entry:
9TKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TKG entry

There are 5 chains in PDB entry 9TKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 14SER 95
B
 GLN 14SER 95
C
 GLN 14SER 95
D
 GLN 14SER 95
E
 GLN 14SER 95
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9TKG

There are 8 sheets in PDB entry 9TKG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 21first strand
Strand 2
C
17 21parallel
Strand 3
A
17 21parallel
Strand 4
B
17 21parallel
Strand 5
E
17 21parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
C
26 27parallel
Strand 3
A
26 27parallel
Strand 4
B
26 27parallel
Strand 5
E
26 27parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 42first strand
Strand 2
C
33 42parallel
Strand 3
A
33 42parallel
Strand 4
B
33 42parallel
Strand 5
E
33 42parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 46first strand
Strand 2
C
45 46parallel
Strand 3
A
45 46parallel
Strand 4
B
45 46parallel
Strand 5
E
45 46parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 55first strand
Strand 2
C
53 55parallel
Strand 3
A
53 55parallel
Strand 4
B
53 55parallel
Strand 5
E
53 55parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
63 68first strand
Strand 2
C
63 68parallel
Strand 3
A
63 68parallel
Strand 4
B
63 68parallel
Strand 5
E
63 68parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 75first strand
Strand 2
C
71 75parallel
Strand 3
A
71 75parallel
Strand 4
B
71 75parallel
Strand 5
E
71 75parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 93first strand
Strand 2
C
83 93parallel
Strand 3
A
83 93parallel
Strand 4
B
83 93parallel
Strand 5
E
83 93parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il