Analysis of interatomic Contacts of Structural Units in PDB entry:
9TLE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TLE entry

There are 8 chains in PDB entry 9TLE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	ILE 16	LEU 247
L	MET 85	GLU 138
A	ALA 1	SER 664
A	GLU 666	ASP 695
A	ASP 697	ASP 697
A	GLN 699	ARG 709
B	SER 1546	TYR 2196
P	ALA 1	GLU 579

There are 46 helices in PDB entry 9TLE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	124	131	Right-handed alpha
Helix 2	AA2	H	164	170	Right-handed alpha
Helix 3	AA3	H	234	242	Right-handed alpha
Helix 4	AA4	L	91	96	Right-handed 310
Helix 5	AA5	A	19	23	Right-handed 310
Helix 6	AA6	A	42	46	Right-handed 310
Helix 7	AA7	A	151	157	Right-handed alpha
Helix 8	AA8	A	284	291	Right-handed alpha
Helix 9	AA9	A	312	318	Right-handed alpha
Helix 10	AB1	A	345	351	Right-handed alpha
Helix 11	AB2	A	384	389	Right-handed alpha
Helix 12	AB3	A	460	464	Right-handed 310
Helix 13	AB4	A	482	488	Right-handed alpha
Helix 14	AB5	A	526	528	Right-handed 310
Helix 15	AB6	A	530	536	Right-handed alpha
Helix 16	AB7	A	549	554	Right-handed alpha
Helix 17	AB8	A	565	569	Right-handed 310
Helix 18	AB9	A	641	646	Right-handed alpha
Helix 19	AC1	A	689	706	Right-handed alpha
Helix 20	AC2	B	1574	1580	Right-handed alpha
Helix 21	AC3	B	1666	1670	Right-handed 310
Helix 22	AC4	B	1685	1689	Right-handed 310
Helix 23	AC5	B	1707	1712	Right-handed alpha
Helix 24	AC6	B	1860	1867	Right-handed alpha
Helix 25	AC7	B	1891	1893	Right-handed 310
Helix 26	AC8	B	1905	1909	Right-handed 310
Helix 27	AC9	B	2050	2052	Right-handed 310
Helix 28	AD1	B	2069	2073	Right-handed 310
Helix 29	AD2	P	23	32	Right-handed alpha
Helix 30	AD3	P	33	48	Right-handed alpha
Helix 31	AD4	P	49	51	Right-handed 310
Helix 32	AD5	P	54	63	Right-handed alpha
Helix 33	AD6	P	104	108	Right-handed 310
Helix 34	AD7	P	171	175	Right-handed 310
Helix 35	AD8	P	196	203	Right-handed alpha
Helix 36	AD9	P	251	255	Right-handed 310
Helix 37	AE1	P	264	271	Right-handed alpha
Helix 38	AE2	P	282	287	Right-handed alpha
Helix 39	AE3	P	361	364	Right-handed 310
Helix 40	AE4	P	368	371	Right-handed 310
Helix 41	AE5	P	442	452	Right-handed alpha
Helix 42	AE6	P	463	468	Right-handed alpha
Helix 43	AE7	P	489	497	Right-handed alpha
Helix 44	AE8	P	518	522	Right-handed 310
Helix 45	AE9	P	548	552	Right-handed 310
Helix 46	AF1	P	566	576	Right-handed alpha

There are 30 sheets in PDB entry 9TLE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	21	first strand
Strand 2	H	156	158	anti-parallel
Strand 3	H	137	140	anti-parallel
Strand 4	H	198	202	anti-parallel
Strand 5	H	207	212	anti-parallel
Strand 6	H	226	230	anti-parallel
Strand 7	H	180	183	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	81	83	first strand
Strand 2	H	65	68	anti-parallel
Strand 3	H	30	34	anti-parallel
Strand 4	H	40	46	anti-parallel
Strand 5	H	51	54	anti-parallel
Strand 6	H	104	108	anti-parallel
Strand 7	H	85	91	anti-parallel
Strand 8	A	665	668	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	117	first strand
Strand 2	L	124	126	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	9	first strand
Strand 2	A	69	75	parallel
Strand 3	A	119	125	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	15	first strand
Strand 2	A	33	36	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	159	164	parallel
Strand 3	A	140	145	anti-parallel
Strand 4	A	85	86	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	210	first strand
Strand 2	A	202	206	anti-parallel
Strand 3	A	184	191	anti-parallel
Strand 4	A	224	232	parallel
Strand 5	A	264	271	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	220	first strand
Strand 2	A	297	299	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	261	first strand
Strand 2	A	238	243	anti-parallel
Strand 3	A	280	282	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	371	first strand
Strand 2	A	323	334	anti-parallel
Strand 3	A	404	409	parallel
Strand 4	A	454	455	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	397	first strand
Strand 2	A	495	498	parallel
Strand 3	A	472	475	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	557	559	first strand
Strand 2	A	514	524	anti-parallel
Strand 3	A	580	588	parallel
Strand 4	A	620	625	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	572	575	first strand
Strand 2	A	648	654	parallel
Strand 3	A	631	637	anti-parallel
Strand 4	A	596	598	anti-parallel
Strand 5	A	612	613	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	604	first strand
Strand 2	A	609	610	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1586	1594	first strand
Strand 2	B	1551	1564	anti-parallel
Strand 3	B	1627	1633	parallel
Strand 4	B	1680	1683	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1620	1623	first strand
Strand 2	B	1718	1723	parallel
Strand 3	B	1697	1702	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1778	1780	first strand
Strand 2	B	1739	1747	anti-parallel
Strand 3	B	1797	1803	parallel
Strand 4	B	1842	1847	anti-parallel
Strand 5	B	1821	1823	anti-parallel
Strand 6	B	1829	1831	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1791	1792	first strand
Strand 2	B	1869	1874	parallel
Strand 3	B	1852	1858	anti-parallel
Strand 4	B	1812	1816	anti-parallel
Strand 5	B	1834	1836	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1895	1897	first strand
Strand 2	B	1935	1937	anti-parallel
Strand 3	B	2012	2019	anti-parallel
Strand 4	B	1964	1970	anti-parallel
Strand 5	B	1976	1978	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1895	1897	first strand
Strand 2	B	1935	1937	anti-parallel
Strand 3	B	2012	2019	anti-parallel
Strand 4	B	1964	1970	anti-parallel
Strand 5	B	1990	1991	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1920	1921	first strand
Strand 2	B	2025	2031	anti-parallel
Strand 3	B	1947	1951	anti-parallel
Strand 4	B	2000	2001	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1943	1945	first strand
Strand 2	B	2008	2010	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1953	1955	first strand
Strand 2	B	1958	1960	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2054	2056	first strand
Strand 2	B	2095	2111	anti-parallel
Strand 3	B	2160	2180	anti-parallel
Strand 4	B	2122	2130	anti-parallel
Strand 5	B	2150	2151	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2054	2056	first strand
Strand 2	B	2095	2111	anti-parallel
Strand 3	B	2187	2194	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2113	2114	first strand
Strand 2	B	2119	2120	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	125	127	first strand
Strand 2	P	135	137	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	335	340	first strand
Strand 2	P	346	352	anti-parallel
Strand 3	P	357	360	anti-parallel
Strand 4	P	421	425	anti-parallel
Strand 5	P	397	406	anti-parallel
Strand 6	P	379	383	anti-parallel
Strand 7	P	335	340	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	366	367	first strand
Strand 2	P	372	373	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	481	486	first strand
Strand 2	P	455	460	anti-parallel
Strand 3	P	528	532	anti-parallel
Strand 4	P	539	545	anti-parallel
Strand 5	P	558	562	anti-parallel
Strand 6	P	506	508	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TLE

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TLE