Analysis of interatomic Contacts of Structural Units in PDB entry:
9TLG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TLG entry

There are 7 chains in PDB entry 9TLG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	SER 664
A	GLU 666	SER 673
B	SER 1546	TYR 2196
H	ILE 16	LYS 243
L	MET 85	ARG 139
P	GLN 169	ARG 320
Q	ILE 16	GLU 247

There are 32 helices in PDB entry 9TLG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	46	Right-handed 310
Helix 2	AA2	A	105	110	Right-handed alpha
Helix 3	AA3	A	151	157	Right-handed alpha
Helix 4	AA4	A	284	290	Right-handed alpha
Helix 5	AA5	A	304	309	Right-handed alpha
Helix 6	AA6	A	346	351	Right-handed alpha
Helix 7	AA7	A	482	488	Right-handed alpha
Helix 8	AA8	A	530	538	Right-handed alpha
Helix 9	AA9	A	551	556	Right-handed alpha
Helix 10	AB1	A	656	660	Right-handed 310
Helix 11	AB2	B	1566	1569	Right-handed 310
Helix 12	AB3	B	1576	1581	Right-handed 310
Helix 13	AB4	B	1610	1614	Right-handed 310
Helix 14	AB5	B	1707	1713	Right-handed alpha
Helix 15	AB6	B	1768	1776	Right-handed alpha
Helix 16	AB7	B	1861	1866	Right-handed alpha
Helix 17	AB8	B	1891	1893	Right-handed 310
Helix 18	AB9	B	1905	1909	Right-handed 310
Helix 19	AC1	B	2050	2052	Right-handed 310
Helix 20	AC2	B	2069	2073	Right-handed 310
Helix 21	AC3	H	124	131	Right-handed alpha
Helix 22	AC4	H	131	133	Right-handed 310
Helix 23	AC5	H	164	171	Right-handed alpha
Helix 24	AC6	H	234	243	Right-handed alpha
Helix 25	AC7	P	172	176	Right-handed 310
Helix 26	AC8	P	196	205	Right-handed alpha
Helix 27	AC9	P	248	252	Right-handed 310
Helix 28	AD1	P	308	316	Right-handed alpha
Helix 29	AD2	Q	60	62	Right-handed 310
Helix 30	AD3	Q	125	130	Right-handed alpha
Helix 31	AD4	Q	164	172	Right-handed alpha
Helix 32	AD5	Q	230	246	Right-handed alpha

There are 31 sheets in PDB entry 9TLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	37	first strand
Strand 2	A	4	15	anti-parallel
Strand 3	A	69	77	parallel
Strand 4	A	119	125	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	65	first strand
Strand 2	A	159	165	parallel
Strand 3	A	139	145	anti-parallel
Strand 4	A	85	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	171	first strand
Strand 2	A	175	176	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	206	first strand
Strand 2	A	183	191	anti-parallel
Strand 3	A	224	232	parallel
Strand 4	A	264	271	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	220	first strand
Strand 2	A	296	299	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	261	first strand
Strand 2	A	238	243	anti-parallel
Strand 3	A	280	282	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	331	first strand
Strand 2	A	365	369	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	409	first strand
Strand 2	A	451	458	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	472	473	first strand
Strand 2	A	497	498	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	557	559	first strand
Strand 2	A	514	524	anti-parallel
Strand 3	A	580	588	parallel
Strand 4	A	620	625	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	572	574	first strand
Strand 2	A	648	653	parallel
Strand 3	A	631	637	anti-parallel
Strand 4	A	596	598	anti-parallel
Strand 5	A	612	613	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	604	first strand
Strand 2	A	609	610	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	665	668	first strand
Strand 2	H	85	91	anti-parallel
Strand 3	H	104	108	anti-parallel
Strand 4	H	51	54	anti-parallel
Strand 5	H	43	46	anti-parallel
Strand 6	H	30	32	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1586	1594	first strand
Strand 2	B	1551	1564	anti-parallel
Strand 3	B	1627	1634	parallel
Strand 4	B	1677	1683	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1620	1623	first strand
Strand 2	B	1718	1723	parallel
Strand 3	B	1697	1702	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1777	1780	first strand
Strand 2	B	1739	1748	anti-parallel
Strand 3	B	1797	1803	parallel
Strand 4	B	1841	1847	anti-parallel
Strand 5	B	1820	1823	anti-parallel
Strand 6	B	1829	1831	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1791	1792	first strand
Strand 2	B	1869	1874	parallel
Strand 3	B	1852	1857	anti-parallel
Strand 4	B	1812	1816	anti-parallel
Strand 5	B	1834	1836	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1895	1897	first strand
Strand 2	B	1935	1947	anti-parallel
Strand 3	B	2008	2019	anti-parallel
Strand 4	B	1964	1970	anti-parallel
Strand 5	B	1990	1991	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1976	1978	first strand
Strand 2	B	1964	1970	anti-parallel
Strand 3	B	2008	2019	anti-parallel
Strand 4	B	1935	1947	anti-parallel
Strand 5	B	2031	2034	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1920	1921	first strand
Strand 2	B	2025	2028	anti-parallel
Strand 3	B	1950	1951	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1953	1954	first strand
Strand 2	B	1959	1960	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2054	2056	first strand
Strand 2	B	2095	2110	anti-parallel
Strand 3	B	2160	2180	anti-parallel
Strand 4	B	2122	2130	anti-parallel
Strand 5	B	2150	2151	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2137	2138	first strand
Strand 2	B	2122	2130	anti-parallel
Strand 3	B	2160	2180	anti-parallel
Strand 4	B	2095	2110	anti-parallel
Strand 5	B	2189	2194	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2113	2114	first strand
Strand 2	B	2119	2120	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	21	first strand
Strand 2	H	156	158	anti-parallel
Strand 3	H	137	140	anti-parallel
Strand 4	H	198	202	anti-parallel
Strand 5	H	207	215	anti-parallel
Strand 6	H	226	230	anti-parallel
Strand 7	H	180	183	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	68	first strand
Strand 2	H	81	83	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	102	103	first strand
Strand 2	L	106	107	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	117	first strand
Strand 2	L	124	126	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	184	185	first strand
Strand 2	P	188	190	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	20	21	first strand
Strand 2	Q	156	161	anti-parallel
Strand 3	Q	135	140	anti-parallel
Strand 4	Q	198	202	anti-parallel
Strand 5	Q	207	215	anti-parallel
Strand 6	Q	226	229	anti-parallel
Strand 7	Q	180	183	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	81	83	first strand
Strand 2	Q	64	68	anti-parallel
Strand 3	Q	30	35	anti-parallel
Strand 4	Q	40	46	anti-parallel
Strand 5	Q	51	54	anti-parallel
Strand 6	Q	104	108	anti-parallel
Strand 7	Q	85	90	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TLG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TLG