Analysis of interatomic Contacts of Structural Units in PDB entry:
9TLX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TLX entry

There are 4 chains in PDB entry 9TLX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0THR 879
B
 PRO 141ALA 150
C
 GLY -3THR 879
D
 PRO 141PRO 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9TLX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 639Right-handed 310
Helix 2
AA2
A
641 655Right-handed alpha
Helix 3
AA3
A
656 660Right-handed 310
Helix 4
AA4
A
664 673Right-handed alpha
Helix 5
AA5
A
677 699Right-handed alpha
Helix 6
AA6
A
701 705Right-handed 310
Helix 7
AA7
A
706 729Right-handed alpha
Helix 8
AA8
A
751 756Right-handed 310
Helix 9
AA9
A
759 775Right-handed alpha
Helix 10
AB1
A
776 781Right-handed alpha
Helix 11
AB2
A
782 795Right-handed alpha
Helix 12
AB3
A
804 831Right-handed alpha
Helix 13
AB4
A
834 839Right-handed alpha
Helix 14
AB5
A
840 855Right-handed alpha
Helix 15
AB6
A
856 858Right-handed 310
Helix 16
AB7
A
864 868Right-handed 310
Helix 17
AB8
A
869 874Right-handed alpha
Helix 18
AB9
B
142 150Right-handed alpha
Helix 19
AC1
C
641 655Right-handed alpha
Helix 20
AC2
C
656 660Right-handed 310
Helix 21
AC3
C
664 673Right-handed alpha
Helix 22
AC4
C
677 699Right-handed alpha
Helix 23
AC5
C
701 705Right-handed 310
Helix 24
AC6
C
706 729Right-handed alpha
Helix 25
AC7
C
751 756Right-handed 310
Helix 26
AC8
C
759 775Right-handed alpha
Helix 27
AC9
C
776 781Right-handed alpha
Helix 28
AD1
C
782 795Right-handed alpha
Helix 29
AD2
C
804 831Right-handed alpha
Helix 30
AD3
C
834 839Right-handed alpha
Helix 31
AD4
C
840 855Right-handed alpha
Helix 32
AD5
C
869 874Right-handed alpha
Helix 33
AD6
D
142 150Right-handed alpha
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There are 2 sheets in PDB entry 9TLX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 731first strand
Strand 2
A
736 737anti-parallel
Strand 3
A
748 749anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
730 731first strand
Strand 2
C
736 738anti-parallel
Strand 3
C
747 749anti-parallel
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