Analysis of interatomic Contacts of Structural Units in PDB entry:
9TN9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TN9 entry

There is 1 chain in PDB entry 9TN9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 604
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9TN9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 9Right-handed alpha
Helix 2
AA2
A
19 24Right-handed alpha
Helix 3
AA3
A
48 54Right-handed alpha
Helix 4
AA4
A
60 69Right-handed alpha
Helix 5
AA5
A
87 99Right-handed alpha
Helix 6
AA6
A
123 130Right-handed alpha
Helix 7
AA7
A
141 150Right-handed alpha
Helix 8
AA8
A
159 171Right-handed alpha
Helix 9
AA9
A
171 177Right-handed alpha
Helix 10
AB1
A
207 218Right-handed alpha
Helix 11
AB2
A
221 223Right-handed 310
Helix 12
AB3
A
249 251Right-handed 310
Helix 13
AB4
A
254 259Right-handed alpha
Helix 14
AB5
A
288 296Right-handed alpha
Helix 15
AB6
A
305 330Right-handed alpha
Helix 16
AB7
A
336 342Right-handed 310
Helix 17
AB8
A
366 381Right-handed alpha
Helix 18
AB9
A
398 400Right-handed 310
Helix 19
AC1
A
401 412Right-handed alpha
Helix 20
AC2
A
441 454Right-handed alpha
Helix 21
AC3
A
475 479Right-handed 310
Helix 22
AC4
A
499 505Right-handed alpha
Helix 23
AC5
A
528 534Right-handed alpha
Helix 24
AC6
A
568 587Right-handed alpha
Helix 25
AC7
A
594 603Right-handed alpha
Helix 26
AC8
A
603 613Right-handed alpha
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There are 6 sheets in PDB entry 9TN9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
36 38anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
282 286anti-parallel
Strand 3
A
270 273anti-parallel
Strand 4
A
193 200parallel
Strand 5
A
153 158parallel
Strand 6
A
104 110parallel
Strand 7
A
116 121anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 231first strand
Strand 2
A
234 239anti-parallel
Strand 3
A
243 247anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
353 356anti-parallel
Strand 3
A
392 397anti-parallel
Strand 4
A
383 386anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 428first strand
Strand 2
A
464 467parallel
Strand 3
A
481 491parallel
Strand 4
A
539 550anti-parallel
Strand 5
A
562 566anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 513first strand
Strand 2
A
516 519anti-parallel
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