Analysis of interatomic Contacts of Structural Units in PDB entry:
9TPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TPT entry

There are 12 chains in PDB entry 9TPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 36LEU 100
F
 GLY 36LEU 100
E
 GLY 36LEU 100
A
 GLY 36LEU 100
D
 GLY 36LEU 100
C
 GLY 36LEU 100
I
 GLY 36GLN 99
N
 GLY 36GLN 99
M
 GLY 36GLN 99
L
 GLY 36GLN 99
H
 GLY 36GLN 99
J
 GLY 36GLN 99
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 9TPT

There are 10 sheets in PDB entry 9TPT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
52 54first strand
Strand 2
E
52 55parallel
Strand 3
A
52 55parallel
Strand 4
B
52 55parallel
Strand 5
C
52 55parallel
Strand 6
D
52 54parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
69 71first strand
Strand 2
E
69 71parallel
Strand 3
A
69 71parallel
Strand 4
B
69 71parallel
Strand 5
C
69 71parallel
Strand 6
D
69 71parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 82first strand
Strand 2
C
80 82parallel
Strand 3
D
80 82parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
88 89first strand
Strand 2
E
88 89parallel
Strand 3
A
88 89parallel
Strand 4
B
88 89parallel
Strand 5
C
88 89parallel
Strand 6
D
88 89parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
80 82first strand
Strand 2
E
80 82parallel
Strand 3
A
80 82parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
52 54first strand
Strand 2
M
52 54parallel
Strand 3
L
52 55parallel
Strand 4
H
52 55parallel
Strand 5
I
52 54parallel
Strand 6
J
52 54parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
69 71first strand
Strand 2
M
69 71parallel
Strand 3
L
69 71parallel
Strand 4
H
69 71parallel
Strand 5
I
69 71parallel
Strand 6
J
69 71parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
80 82first strand
Strand 2
H
80 82parallel
Strand 3
I
80 82parallel
Strand 4
J
80 82parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
88 89first strand
Strand 2
M
88 89parallel
Strand 3
L
88 89parallel
Strand 4
H
88 89parallel
Strand 5
I
88 89parallel
Strand 6
J
88 89parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
80 82first strand
Strand 2
M
80 82parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il