Analysis of interatomic Contacts of Structural Units in PDB entry:
9TQB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TQB entry

There are 8 chains in PDB entry 9TQB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 LYS 7THR 107
H
 PRO 14GLN 129
F
 MET 1LEU 56
E
 GLU 32ARG 80
A
 ILE 69PRO 192
B
 PRO 54VAL 145
C
 MET 1SER 106
D
 ASP 3GLN 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9TQB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
G
7 88Right-handed alpha
Helix 2
AA2
G
90 107Right-handed alpha
Helix 3
AA3
H
20 129Right-handed alpha
Helix 4
AA4
F
12 56Right-handed alpha
Helix 5
AA5
E
35 43Right-handed alpha
Helix 6
AA6
E
45 80Right-handed alpha
Helix 7
AA7
A
70 74Right-handed alpha
Helix 8
AA8
A
77 82Right-handed alpha
Helix 9
AA9
A
93 183Right-handed alpha
Helix 10
AB1
A
185 190Right-handed alpha
Helix 11
AB2
B
55 145Right-handed alpha
Helix 12
AB3
C
2 34Right-handed alpha
Helix 13
AB4
C
34 97Right-handed alpha
Helix 14
AB5
D
5 107Right-handed alpha
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There are no sheets in PDB entry 9TQB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il