Analysis of interatomic Contacts of Structural Units in PDB entry:
9TQG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TQG entry

There are 7 chains in PDB entry 9TQG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	MET 535
B	ALA 2	MET 535
C	ALA 2	MET 535
D	ALA 2	MET 535
E	LYS 3	MET 535
F	ALA 2	MET 535
L	ASP 475	LYS 595

There are163 helices in PDB entry 9TQG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	37	Right-handed alpha
Helix 2	AA2	A	41	50	Right-handed alpha
Helix 3	AA3	A	55	64	Right-handed alpha
Helix 4	AA4	A	86	89	Right-handed 310
Helix 5	AA5	A	112	116	Right-handed 310
Helix 6	AA6	A	118	136	Right-handed alpha
Helix 7	AA7	A	152	156	Right-handed 310
Helix 8	AA8	A	164	176	Right-handed alpha
Helix 9	AA9	A	189	192	Right-handed 310
Helix 10	AB1	A	193	199	Right-handed alpha
Helix 11	AB2	A	215	224	Right-handed alpha
Helix 12	AB3	A	228	234	Right-handed alpha
Helix 13	AB4	A	234	239	Right-handed alpha
Helix 14	AB5	A	251	265	Right-handed alpha
Helix 15	AB6	A	285	291	Right-handed 310
Helix 16	AB7	A	303	308	Right-handed alpha
Helix 17	AB8	A	309	310	Right-handed 310
Helix 18	AB9	A	311	315	Right-handed 310
Helix 19	AC1	A	349	367	Right-handed alpha
Helix 20	AC2	A	382	389	Right-handed alpha
Helix 21	AC3	A	389	404	Right-handed alpha
Helix 22	AC4	A	418	424	Right-handed alpha
Helix 23	AC5	A	426	430	Right-handed 310
Helix 24	AC6	A	446	465	Right-handed alpha
Helix 25	AC7	A	470	488	Right-handed alpha
Helix 26	AC8	A	490	497	Right-handed alpha
Helix 27	AC9	A	505	507	Right-handed 310
Helix 28	AD1	A	508	521	Right-handed alpha
Helix 29	AD2	B	12	38	Right-handed alpha
Helix 30	AD3	B	41	51	Right-handed alpha
Helix 31	AD4	B	55	64	Right-handed alpha
Helix 32	AD5	B	86	89	Right-handed 310
Helix 33	AD6	B	112	116	Right-handed 310
Helix 34	AD7	B	118	136	Right-handed alpha
Helix 35	AD8	B	149	156	Right-handed 310
Helix 36	AD9	B	164	175	Right-handed alpha
Helix 37	AE1	B	189	195	Right-handed 310
Helix 38	AE2	B	215	224	Right-handed alpha
Helix 39	AE3	B	228	234	Right-handed alpha
Helix 40	AE4	B	234	241	Right-handed alpha
Helix 41	AE5	B	251	265	Right-handed alpha
Helix 42	AE6	B	285	292	Right-handed 310
Helix 43	AE7	B	303	309	Right-handed alpha
Helix 44	AE8	B	310	315	Right-handed 310
Helix 45	AE9	B	349	367	Right-handed alpha
Helix 46	AF1	B	382	388	Right-handed alpha
Helix 47	AF2	B	389	404	Right-handed alpha
Helix 48	AF3	B	419	424	Right-handed alpha
Helix 49	AF4	B	426	430	Right-handed 310
Helix 50	AF5	B	446	464	Right-handed alpha
Helix 51	AF6	B	470	488	Right-handed alpha
Helix 52	AF7	B	490	496	Right-handed alpha
Helix 53	AF8	B	505	507	Right-handed 310
Helix 54	AF9	B	508	521	Right-handed alpha
Helix 55	AG1	C	12	39	Right-handed alpha
Helix 56	AG2	C	41	51	Right-handed alpha
Helix 57	AG3	C	55	64	Right-handed alpha
Helix 58	AG4	C	86	89	Right-handed 310
Helix 59	AG5	C	112	116	Right-handed 310
Helix 60	AG6	C	118	136	Right-handed alpha
Helix 61	AG7	C	149	156	Right-handed 310
Helix 62	AG8	C	164	176	Right-handed alpha
Helix 63	AG9	C	189	192	Right-handed 310
Helix 64	AH1	C	193	199	Right-handed alpha
Helix 65	AH2	C	215	223	Right-handed alpha
Helix 66	AH3	C	228	234	Right-handed alpha
Helix 67	AH4	C	234	239	Right-handed alpha
Helix 68	AH5	C	251	264	Right-handed alpha
Helix 69	AH6	C	285	292	Right-handed 310
Helix 70	AH7	C	303	308	Right-handed alpha
Helix 71	AH8	C	311	315	Right-handed 310
Helix 72	AH9	C	350	366	Right-handed alpha
Helix 73	AI1	C	382	388	Right-handed alpha
Helix 74	AI2	C	389	404	Right-handed alpha
Helix 75	AI3	C	418	423	Right-handed alpha
Helix 76	AI4	C	426	430	Right-handed 310
Helix 77	AI5	C	446	465	Right-handed alpha
Helix 78	AI6	C	470	488	Right-handed alpha
Helix 79	AI7	C	490	497	Right-handed alpha
Helix 80	AI8	C	505	507	Right-handed 310
Helix 81	AI9	C	508	521	Right-handed alpha
Helix 82	AJ1	D	12	37	Right-handed alpha
Helix 83	AJ2	D	41	51	Right-handed alpha
Helix 84	AJ3	D	55	64	Right-handed alpha
Helix 85	AJ4	D	86	89	Right-handed 310
Helix 86	AJ5	D	112	116	Right-handed 310
Helix 87	AJ6	D	118	136	Right-handed alpha
Helix 88	AJ7	D	149	156	Right-handed 310
Helix 89	AJ8	D	164	176	Right-handed alpha
Helix 90	AJ9	D	189	192	Right-handed 310
Helix 91	AK1	D	193	199	Right-handed alpha
Helix 92	AK2	D	215	222	Right-handed alpha
Helix 93	AK3	D	228	234	Right-handed alpha
Helix 94	AK4	D	234	239	Right-handed alpha
Helix 95	AK5	D	251	264	Right-handed alpha
Helix 96	AK6	D	285	291	Right-handed 310
Helix 97	AK7	D	303	309	Right-handed alpha
Helix 98	AK8	D	310	315	Right-handed 310
Helix 99	AK9	D	349	367	Right-handed alpha
Helix 100	AL1	D	382	389	Right-handed alpha
Helix 101	AL2	D	390	404	Right-handed alpha
Helix 102	AL3	D	418	424	Right-handed alpha
Helix 103	AL4	D	426	430	Right-handed 310
Helix 104	AL5	D	446	465	Right-handed alpha
Helix 105	AL6	D	470	489	Right-handed alpha
Helix 106	AL7	D	490	497	Right-handed alpha
Helix 107	AL8	D	505	507	Right-handed 310
Helix 108	AL9	D	508	521	Right-handed alpha
Helix 109	AM1	E	12	37	Right-handed alpha
Helix 110	AM2	E	41	51	Right-handed alpha
Helix 111	AM3	E	55	63	Right-handed alpha
Helix 112	AM4	E	86	91	Right-handed 310
Helix 113	AM5	E	111	116	Right-handed 310
Helix 114	AM6	E	118	136	Right-handed alpha
Helix 115	AM7	E	152	156	Right-handed 310
Helix 116	AM8	E	164	174	Right-handed alpha
Helix 117	AM9	E	193	199	Right-handed alpha
Helix 118	AN1	E	215	223	Right-handed alpha
Helix 119	AN2	E	229	234	Right-handed alpha
Helix 120	AN3	E	234	239	Right-handed alpha
Helix 121	AN4	E	251	264	Right-handed alpha
Helix 122	AN5	E	285	292	Right-handed 310
Helix 123	AN6	E	303	308	Right-handed alpha
Helix 124	AN7	E	309	310	Right-handed 310
Helix 125	AN8	E	311	315	Right-handed 310
Helix 126	AN9	E	349	367	Right-handed alpha
Helix 127	AO1	E	382	389	Right-handed alpha
Helix 128	AO2	E	390	403	Right-handed alpha
Helix 129	AO3	E	419	424	Right-handed alpha
Helix 130	AO4	E	426	430	Right-handed 310
Helix 131	AO5	E	446	464	Right-handed alpha
Helix 132	AO6	E	470	488	Right-handed alpha
Helix 133	AO7	E	490	497	Right-handed alpha
Helix 134	AO8	E	508	521	Right-handed alpha
Helix 135	AO9	F	12	38	Right-handed alpha
Helix 136	AP1	F	41	51	Right-handed alpha
Helix 137	AP2	F	55	64	Right-handed alpha
Helix 138	AP3	F	86	89	Right-handed 310
Helix 139	AP4	F	112	116	Right-handed 310
Helix 140	AP5	F	118	136	Right-handed alpha
Helix 141	AP6	F	149	156	Right-handed 310
Helix 142	AP7	F	163	175	Right-handed alpha
Helix 143	AP8	F	193	198	Right-handed alpha
Helix 144	AP9	F	215	224	Right-handed alpha
Helix 145	AQ1	F	228	233	Right-handed alpha
Helix 146	AQ2	F	234	241	Right-handed alpha
Helix 147	AQ3	F	251	265	Right-handed alpha
Helix 148	AQ4	F	286	292	Right-handed 310
Helix 149	AQ5	F	303	308	Right-handed alpha
Helix 150	AQ6	F	309	310	Right-handed 310
Helix 151	AQ7	F	311	315	Right-handed 310
Helix 152	AQ8	F	349	365	Right-handed alpha
Helix 153	AQ9	F	382	389	Right-handed alpha
Helix 154	AR1	F	390	404	Right-handed alpha
Helix 155	AR2	F	419	424	Right-handed alpha
Helix 156	AR3	F	426	430	Right-handed 310
Helix 157	AR4	F	450	464	Right-handed alpha
Helix 158	AR5	F	470	490	Right-handed alpha
Helix 159	AR6	F	490	496	Right-handed alpha
Helix 160	AR7	F	505	507	Right-handed 310
Helix 161	AR8	F	508	520	Right-handed alpha
Helix 162	AR9	L	476	494	Right-handed alpha
Helix 163	AS1	L	497	503	Right-handed alpha

There are 22 sheets in PDB entry 9TQG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	72	first strand
Strand 2	A	91	98	anti-parallel
Strand 3	A	101	108	anti-parallel
Strand 4	A	139	143	parallel
Strand 5	A	180	184	parallel
Strand 6	A	201	205	parallel
Strand 7	A	247	249	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	319	first strand
Strand 2	A	327	334	anti-parallel
Strand 3	A	337	344	anti-parallel
Strand 4	A	370	373	parallel
Strand 5	A	408	412	parallel
Strand 6	A	433	436	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	417	first strand
Strand 2	A	441	443	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	73	first strand
Strand 2	B	91	98	anti-parallel
Strand 3	B	101	108	anti-parallel
Strand 4	B	139	143	parallel
Strand 5	B	180	184	parallel
Strand 6	B	201	205	parallel
Strand 7	B	247	249	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	318	first strand
Strand 2	B	327	334	anti-parallel
Strand 3	B	337	344	anti-parallel
Strand 4	B	370	374	parallel
Strand 5	B	408	412	parallel
Strand 6	B	433	436	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	417	first strand
Strand 2	B	442	443	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	91	98	anti-parallel
Strand 3	C	101	108	anti-parallel
Strand 4	C	139	143	parallel
Strand 5	C	180	184	parallel
Strand 6	C	201	205	parallel
Strand 7	C	247	249	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	188	first strand
Strand 2	C	210	211	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	318	first strand
Strand 2	C	327	334	anti-parallel
Strand 3	C	337	344	anti-parallel
Strand 4	C	370	376	parallel
Strand 5	C	408	417	parallel
Strand 6	C	433	436	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	318	first strand
Strand 2	C	327	334	anti-parallel
Strand 3	C	337	344	anti-parallel
Strand 4	C	370	376	parallel
Strand 5	C	408	417	parallel
Strand 6	C	441	443	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	73	first strand
Strand 2	D	91	98	anti-parallel
Strand 3	D	101	108	anti-parallel
Strand 4	D	139	143	parallel
Strand 5	D	180	184	parallel
Strand 6	D	201	205	parallel
Strand 7	D	247	249	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	317	318	first strand
Strand 2	D	327	334	anti-parallel
Strand 3	D	337	344	anti-parallel
Strand 4	D	370	374	parallel
Strand 5	D	408	412	parallel
Strand 6	D	433	436	parallel
Strand 7	D	502	503	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	415	417	first strand
Strand 2	D	441	443	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	72	first strand
Strand 2	E	94	98	anti-parallel
Strand 3	E	101	107	anti-parallel
Strand 4	E	139	143	parallel
Strand 5	E	180	184	parallel
Strand 6	E	201	205	parallel
Strand 7	E	247	249	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	187	189	first strand
Strand 2	E	210	212	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	317	319	first strand
Strand 2	E	327	334	anti-parallel
Strand 3	E	337	344	anti-parallel
Strand 4	E	370	376	parallel
Strand 5	E	408	417	parallel
Strand 6	E	433	436	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	317	319	first strand
Strand 2	E	327	334	anti-parallel
Strand 3	E	337	344	anti-parallel
Strand 4	E	370	376	parallel
Strand 5	E	408	417	parallel
Strand 6	E	441	443	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	73	first strand
Strand 2	F	91	98	anti-parallel
Strand 3	F	101	108	anti-parallel
Strand 4	F	139	143	parallel
Strand 5	F	180	184	parallel
Strand 6	F	201	205	parallel
Strand 7	F	247	249	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	187	188	first strand
Strand 2	F	210	211	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	317	318	first strand
Strand 2	F	327	334	anti-parallel
Strand 3	F	337	344	anti-parallel
Strand 4	F	370	374	parallel
Strand 5	F	408	412	parallel
Strand 6	F	433	436	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	415	416	first strand
Strand 2	F	441	442	parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	514	519	first strand
Strand 2	L	524	531	anti-parallel
Strand 3	L	536	541	anti-parallel
Strand 4	L	544	553	anti-parallel
Strand 5	L	556	560	anti-parallel
Strand 6	L	565	572	anti-parallel
Strand 7	L	576	581	anti-parallel
Strand 8	L	584	590	anti-parallel
Strand 9	L	514	519	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TQG

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TQG