Analysis of interatomic Contacts of Structural Units in PDB entry:
9TRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TRO entry

There are 14 chains in PDB entry 9TRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ALA 1LEU 5
L
 LEU 8LEU 13
L
 ARG 15ARG 15
L
 CYS 17LYS 18
L
 GLN 21PHE 24
L
 ALA 27ARG 28
L
 ILE 30LYS 32
A
 ALA 1LEU 5
A
 LEU 8LEU 13
A
 ARG 15ARG 15
A
 CYS 17LYS 18
A
 GLN 21PHE 24
A
 ALA 27ARG 28
A
 ILE 30PHE 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9TRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
5 9Right-handed 310
Helix 2
AA2
L
12 18Right-handed alpha
Helix 3
AA3
L
23 32Right-handed alpha
Helix 4
AA4
A
5 9Right-handed 310
Helix 5
AA5
A
12 18Right-handed alpha
Helix 6
AA6
A
23 31Right-handed alpha
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There are no sheets in PDB entry 9TRO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il