Analysis of interatomic Contacts of Structural Units in PDB entry:
9TSN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TSN entry

There are 3 chains in PDB entry 9TSN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 6	ASN 289
B	SER 2	ASN 290
C	SER 5	GLY 291

There are no helices in PDB entry 9TSN

There are 21 sheets in PDB entry 9TSN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	37	first strand
Strand 2	A	20	28	anti-parallel
Strand 3	A	8	15	anti-parallel
Strand 4	A	284	288	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	52	first strand
Strand 2	A	55	59	anti-parallel
Strand 3	A	72	76	anti-parallel
Strand 4	A	81	85	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	100	first strand
Strand 2	A	103	110	anti-parallel
Strand 3	A	115	122	anti-parallel
Strand 4	A	129	132	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	147	first strand
Strand 2	A	150	154	anti-parallel
Strand 3	A	165	169	anti-parallel
Strand 4	A	174	178	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	197	205	anti-parallel
Strand 3	A	209	218	anti-parallel
Strand 4	A	223	226	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	194	first strand
Strand 2	A	197	205	anti-parallel
Strand 3	A	209	218	anti-parallel
Strand 4	B	3	4	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	241	first strand
Strand 2	A	246	249	anti-parallel
Strand 3	A	260	264	anti-parallel
Strand 4	A	269	273	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	36	first strand
Strand 2	B	20	28	anti-parallel
Strand 3	B	8	15	anti-parallel
Strand 4	B	284	288	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	52	first strand
Strand 2	B	55	59	anti-parallel
Strand 3	B	72	76	anti-parallel
Strand 4	B	81	85	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	100	first strand
Strand 2	B	103	110	anti-parallel
Strand 3	B	115	122	anti-parallel
Strand 4	B	129	132	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	147	first strand
Strand 2	B	150	154	anti-parallel
Strand 3	B	165	169	anti-parallel
Strand 4	B	174	178	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	197	205	anti-parallel
Strand 3	B	190	194	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	197	205	anti-parallel
Strand 3	B	210	218	anti-parallel
Strand 4	B	223	227	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	241	first strand
Strand 2	B	246	249	anti-parallel
Strand 3	B	260	264	anti-parallel
Strand 4	B	269	273	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	20	28	anti-parallel
Strand 3	C	7	15	anti-parallel
Strand 4	C	284	289	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	52	first strand
Strand 2	C	55	59	anti-parallel
Strand 3	C	72	76	anti-parallel
Strand 4	C	81	85	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	100	first strand
Strand 2	C	103	110	anti-parallel
Strand 3	C	115	122	anti-parallel
Strand 4	C	129	132	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	147	first strand
Strand 2	C	150	157	anti-parallel
Strand 3	C	161	169	anti-parallel
Strand 4	C	174	178	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	204	205	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	194	first strand
Strand 2	C	197	201	anti-parallel
Strand 3	C	214	218	anti-parallel
Strand 4	C	223	227	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	241	first strand
Strand 2	C	246	249	anti-parallel
Strand 3	C	260	263	anti-parallel
Strand 4	C	270	273	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TSN

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TSN