Analysis of interatomic Contacts of Structural Units in PDB entry:
9TV0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TV0 entry

There are 2 chains in PDB entry 9TV0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 25	LYS 769
B	HIS 32	TYR 358

There are 14 helices in PDB entry 9TV0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	35	Right-handed alpha
Helix 2	AA2	A	41	47	Right-handed alpha
Helix 3	AA3	A	78	85	Right-handed alpha
Helix 4	AA4	A	93	101	Right-handed alpha
Helix 5	AA5	A	111	115	Right-handed alpha
Helix 6	AA6	A	196	212	Right-handed alpha
Helix 7	AA7	A	232	234	Right-handed 310
Helix 8	AA8	A	324	328	Right-handed 310
Helix 9	AA9	A	363	371	Right-handed alpha
Helix 10	AB1	A	393	396	Right-handed 310
Helix 11	AB2	A	429	438	Right-handed alpha
Helix 12	AB3	A	599	608	Right-handed alpha
Helix 13	AB4	A	614	619	Right-handed alpha
Helix 14	AB5	A	620	624	Right-handed 310

There are 24 sheets in PDB entry 9TV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	156	158	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	74	first strand
Strand 2	A	147	153	anti-parallel
Strand 3	A	139	143	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	169	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	189	193	anti-parallel
Strand 4	B	311	315	anti-parallel
Strand 5	B	303	307	anti-parallel
Strand 6	B	289	295	anti-parallel
Strand 7	B	279	286	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	179	first strand
Strand 2	A	216	218	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	226	first strand
Strand 2	A	229	230	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	256	first strand
Strand 2	A	266	268	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	273	first strand
Strand 2	A	283	284	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	300	first strand
Strand 2	A	305	308	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	338	first strand
Strand 2	A	347	349	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	357	first strand
Strand 2	A	360	362	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	391	first strand
Strand 2	A	466	476	anti-parallel
Strand 3	A	405	416	anti-parallel
Strand 4	A	426	428	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	391	first strand
Strand 2	A	466	476	anti-parallel
Strand 3	A	381	383	anti-parallel
Strand 4	A	560	566	anti-parallel
Strand 5	A	630	639	anti-parallel
Strand 6	A	579	589	anti-parallel
Strand 7	A	596	598	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	400	first strand
Strand 2	A	442	444	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	574	575	first strand
Strand 2	A	612	613	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	648	653	first strand
Strand 2	A	656	661	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	691	first strand
Strand 2	A	701	703	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	707	710	first strand
Strand 2	A	713	716	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	729	733	first strand
Strand 2	A	736	740	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	746	748	first strand
Strand 2	A	751	753	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	758	761	first strand
Strand 2	A	765	768	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	43	first strand
Strand 2	B	350	357	anti-parallel
Strand 3	B	339	347	anti-parallel
Strand 4	B	331	336	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	60	66	anti-parallel
Strand 3	B	76	83	anti-parallel
Strand 4	B	86	92	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	149	first strand
Strand 2	B	133	138	anti-parallel
Strand 3	B	114	119	anti-parallel
Strand 4	B	104	109	anti-parallel
Strand 5	B	164	166	parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	181	first strand
Strand 2	B	197	201	anti-parallel
Strand 3	B	211	215	anti-parallel
Strand 4	B	265	270	parallel
Strand 5	B	256	262	anti-parallel
Strand 6	B	236	239	anti-parallel
Strand 7	B	230	233	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TV0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TV0