Analysis of interatomic Contacts of Structural Units in PDB entry:
9TXI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TXI entry

There is 1 chain in PDB entry 9TXI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32HIS 901
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9TXI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 103Right-handed alpha
Helix 2
AA2
A
198 200Right-handed 310
Helix 3
AA3
A
218 223Right-handed alpha
Helix 4
AA4
A
282 286Right-handed 310
Helix 5
AA5
A
287 303Right-handed alpha
Helix 6
AA6
A
330 342Right-handed alpha
Helix 7
AA7
A
351 366Right-handed alpha
Helix 8
AA8
A
394 407Right-handed alpha
Helix 9
AA9
A
422 432Right-handed alpha
Helix 10
AB1
A
445 457Right-handed alpha
Helix 11
AB2
A
525 533Right-handed alpha
Helix 12
AB3
A
542 560Right-handed alpha
Helix 13
AB4
A
567 582Right-handed alpha
Helix 14
AB5
A
845 849Right-handed 310
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There are 7 sheets in PDB entry 9TXI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
210 215anti-parallel
Strand 3
A
172 179anti-parallel
Strand 4
A
33 45parallel
Strand 5
A
48 59anti-parallel
Strand 6
A
139 149anti-parallel
Strand 7
A
78 86anti-parallel
Strand 8
A
89 97anti-parallel
Strand 9
A
589 593anti-parallel
Strand 10
A
604 606anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 74first strand
Strand 2
A
125 134anti-parallel
Strand 3
A
118 120anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 163first strand
Strand 2
A
235 243anti-parallel
Strand 3
A
184 191anti-parallel
Strand 4
A
788 791anti-parallel
Strand 5
A
796 799anti-parallel
Strand 6
A
804 809anti-parallel
Strand 7
A
812 819anti-parallel
Strand 8
A
827 832anti-parallel
Strand 9
A
704 707parallel
Strand 10
A
715 720anti-parallel
Strand 11
A
891 900parallel
Strand 12
A
872 883anti-parallel
Strand 13
A
864 869anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 255first strand
Strand 2
A
258 263anti-parallel
Strand 3
A
491 497anti-parallel
Strand 4
A
474 477anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
273 280parallel
Strand 4
A
377 384parallel
Strand 5
A
411 417parallel
Strand 6
A
437 440parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
460 468anti-parallel
Strand 3
A
507 512anti-parallel
Strand 4
A
517 522anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
727 732first strand
Strand 2
A
737 743anti-parallel
Strand 3
A
750 757anti-parallel
Strand 4
A
762 766anti-parallel
Strand 5
A
771 774anti-parallel
Strand 6
A
779 782anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il