Analysis of interatomic Contacts of Structural Units in PDB entry:
9TXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TXJ entry

There are 3 chains in PDB entry 9TXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32HIS 901
D
 VAL 1SER 215
E
 ASP 1ARG 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9TXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 103Right-handed alpha
Helix 2
AA2
A
195 200Right-handed 310
Helix 3
AA3
A
218 223Right-handed alpha
Helix 4
AA4
A
287 303Right-handed alpha
Helix 5
AA5
A
330 342Right-handed alpha
Helix 6
AA6
A
351 365Right-handed alpha
Helix 7
AA7
A
394 407Right-handed alpha
Helix 8
AA8
A
422 432Right-handed alpha
Helix 9
AA9
A
445 457Right-handed alpha
Helix 10
AB1
A
526 533Right-handed alpha
Helix 11
AB2
A
542 560Right-handed alpha
Helix 12
AB3
A
567 582Right-handed alpha
Helix 13
AB4
A
845 850Right-handed 310
Helix 14
AB5
D
61 64Right-handed 310
Helix 15
AB6
D
86 90Right-handed 310
Helix 16
AB7
E
79 83Right-handed 310
Helix 17
AB8
E
120 126Right-handed alpha
Helix 18
AB9
E
182 188Right-handed alpha
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There are 19 sheets in PDB entry 9TXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 206first strand
Strand 2
A
210 215anti-parallel
Strand 3
A
172 179anti-parallel
Strand 4
A
33 45parallel
Strand 5
A
48 59anti-parallel
Strand 6
A
139 149anti-parallel
Strand 7
A
78 86anti-parallel
Strand 8
A
89 97anti-parallel
Strand 9
A
589 593anti-parallel
Strand 10
A
604 605anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 74first strand
Strand 2
A
125 134anti-parallel
Strand 3
A
118 120anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 163first strand
Strand 2
A
235 243anti-parallel
Strand 3
A
184 191anti-parallel
Strand 4
A
788 792anti-parallel
Strand 5
A
795 799anti-parallel
Strand 6
A
804 809anti-parallel
Strand 7
A
812 819anti-parallel
Strand 8
A
827 832anti-parallel
Strand 9
A
704 707parallel
Strand 10
A
715 720anti-parallel
Strand 11
A
891 900parallel
Strand 12
A
872 883anti-parallel
Strand 13
A
864 869anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 255first strand
Strand 2
A
258 263anti-parallel
Strand 3
A
491 497anti-parallel
Strand 4
A
474 477anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
274 280parallel
Strand 4
A
378 384parallel
Strand 5
A
411 417parallel
Strand 6
A
437 440parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 486first strand
Strand 2
A
460 468anti-parallel
Strand 3
A
504 513anti-parallel
Strand 4
A
516 525anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
727 732first strand
Strand 2
A
737 743anti-parallel
Strand 3
A
750 757anti-parallel
Strand 4
A
762 766anti-parallel
Strand 5
A
771 774anti-parallel
Strand 6
A
779 782anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 5first strand
Strand 2
D
17 22anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
67 72anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 10first strand
Strand 2
D
109 112parallel
Strand 3
D
91 98anti-parallel
Strand 4
D
32 38anti-parallel
Strand 5
D
44 50anti-parallel
Strand 6
D
57 59anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 10first strand
Strand 2
D
109 112parallel
Strand 3
D
91 98anti-parallel
Strand 4
D
103 105anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
122 126first strand
Strand 2
D
137 145anti-parallel
Strand 3
D
176 186anti-parallel
Strand 4
D
165 167anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
122 126first strand
Strand 2
D
137 145anti-parallel
Strand 3
D
176 186anti-parallel
Strand 4
D
171 173anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
153 155first strand
Strand 2
D
196 200anti-parallel
Strand 3
D
207 211anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 7first strand
Strand 2
E
18 25anti-parallel
Strand 3
E
70 76anti-parallel
Strand 4
E
62 67anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 54first strand
Strand 2
E
45 50anti-parallel
Strand 3
E
33 38anti-parallel
Strand 4
E
85 90anti-parallel
Strand 5
E
96 97anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 54first strand
Strand 2
E
45 50anti-parallel
Strand 3
E
33 38anti-parallel
Strand 4
E
85 90anti-parallel
Strand 5
E
101 102anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
113 117first strand
Strand 2
E
132 138anti-parallel
Strand 3
E
172 177anti-parallel
Strand 4
E
159 162anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 129first strand
Strand 2
E
180 181anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 149first strand
Strand 2
E
190 196anti-parallel
Strand 3
E
204 209anti-parallel
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