Analysis of interatomic Contacts of Structural Units in PDB entry:
9TYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TYG entry

There are 2 chains in PDB entry 9TYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ASN 388
B
 PRO 11SER 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9TYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
110 121Right-handed alpha
Helix 4
AA4
A
122 127Right-handed 310
Helix 5
AA5
A
157 165Right-handed alpha
Helix 6
AA6
A
168 188Right-handed alpha
Helix 7
AA7
A
198 200Right-handed 310
Helix 8
AA8
A
215 218Right-handed 310
Helix 9
AA9
A
219 224Right-handed alpha
Helix 10
AB1
A
237 243Right-handed alpha
Helix 11
AB2
A
249 265Right-handed alpha
Helix 12
AB3
A
315 325Right-handed alpha
Helix 13
AB4
A
337 347Right-handed alpha
Helix 14
AB5
A
357 362Right-handed alpha
Helix 15
AB6
A
364 373Right-handed alpha
Helix 16
AB7
A
376 385Right-handed alpha
Helix 17
AB8
B
58 60Right-handed 310
Helix 18
AB9
B
61 76Right-handed alpha
Helix 19
AC1
B
112 119Right-handed alpha
Helix 20
AC2
B
122 143Right-handed alpha
Helix 21
AC3
B
151 153Right-handed 310
Helix 22
AC4
B
167 171Right-handed 310
Helix 23
AC5
B
195 202Right-handed alpha
Helix 24
AC6
B
207 222Right-handed alpha
Helix 25
AC7
B
235 244Right-handed alpha
Helix 26
AC8
B
248 253Right-handed alpha
Helix 27
AC9
B
257 267Right-handed alpha
Helix 28
AD1
B
274 279Right-handed alpha
Helix 29
AD2
B
283 294Right-handed alpha
Helix 30
AD3
B
303 310Right-handed alpha
Helix 31
AD4
B
311 314Right-handed 310
Helix 32
AD5
B
339 351Right-handed alpha
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There are 7 sheets in PDB entry 9TYG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
100 105anti-parallel
Strand 4
A
145 149anti-parallel
Strand 5
A
135 140anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
202 204anti-parallel
Strand 3
A
210 212anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
18 19anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 26first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
30 33anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 26first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
50 56anti-parallel
Strand 4
B
101 106anti-parallel
Strand 5
B
86 91anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 111first strand
Strand 2
B
155 157anti-parallel
Strand 3
B
163 165anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
172 173anti-parallel
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