Analysis of interatomic Contacts of Structural Units in PDB entry:
9TZ3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TZ3 entry

There are 6 chains in PDB entry 9TZ3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 4	PHE 871
B	GLY 2	ALA 1364
C	GLU 110	LYS 450
D	VAL 38	GLU 402
E	VAL 0	GLN 79
F	SER 15	LEU 27

There are111 helices in PDB entry 9TZ3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	41	Right-handed alpha
Helix 2	AA2	A	42	47	Right-handed 310
Helix 3	AA3	A	98	100	Right-handed 310
Helix 4	AA4	A	170	184	Right-handed alpha
Helix 5	AA5	A	190	205	Right-handed alpha
Helix 6	AA6	A	238	242	Right-handed 310
Helix 7	AA7	A	268	273	Right-handed alpha
Helix 8	AA8	A	280	286	Right-handed 310
Helix 9	AA9	A	289	300	Right-handed alpha
Helix 10	AB1	A	309	319	Right-handed alpha
Helix 11	AB2	A	322	326	Right-handed 310
Helix 12	AB3	A	329	334	Right-handed 310
Helix 13	AB4	A	346	351	Right-handed alpha
Helix 14	AB5	A	364	368	Right-handed 310
Helix 15	AB6	A	373	385	Right-handed alpha
Helix 16	AB7	A	395	402	Right-handed alpha
Helix 17	AB8	A	403	406	Right-handed 310
Helix 18	AB9	A	407	413	Right-handed alpha
Helix 19	AC1	A	474	484	Right-handed alpha
Helix 20	AC2	A	486	502	Right-handed alpha
Helix 21	AC3	A	503	510	Right-handed alpha
Helix 22	AC4	A	510	529	Right-handed alpha
Helix 23	AC5	A	532	560	Right-handed alpha
Helix 24	AC6	A	565	578	Right-handed alpha
Helix 25	AC7	A	641	660	Right-handed alpha
Helix 26	AC8	A	690	697	Right-handed alpha
Helix 27	AC9	A	699	708	Right-handed alpha
Helix 28	AD1	A	713	717	Right-handed 310
Helix 29	AD2	A	718	740	Right-handed alpha
Helix 30	AD3	A	780	787	Right-handed alpha
Helix 31	AD4	A	792	809	Right-handed alpha
Helix 32	AD5	A	812	821	Right-handed alpha
Helix 33	AD6	A	834	836	Right-handed 310
Helix 34	AD7	A	837	847	Right-handed alpha
Helix 35	AD8	A	853	868	Right-handed alpha
Helix 36	AD9	B	15	21	Right-handed 310
Helix 37	AE1	B	64	78	Right-handed alpha
Helix 38	AE2	B	110	114	Right-handed alpha
Helix 39	AE3	B	121	142	Right-handed alpha
Helix 40	AE4	B	180	187	Right-handed alpha
Helix 41	AE5	B	238	252	Right-handed alpha
Helix 42	AE6	B	260	270	Right-handed alpha
Helix 43	AE7	B	274	279	Right-handed alpha
Helix 44	AE8	B	283	294	Right-handed alpha
Helix 45	AE9	B	297	301	Right-handed 310
Helix 46	AF1	B	303	311	Right-handed alpha
Helix 47	AF2	B	318	323	Right-handed alpha
Helix 48	AF3	B	323	329	Right-handed alpha
Helix 49	AF4	B	338	349	Right-handed alpha
Helix 50	AF5	B	349	358	Right-handed alpha
Helix 51	AF6	B	374	385	Right-handed alpha
Helix 52	AF7	B	391	405	Right-handed alpha
Helix 53	AF8	B	410	418	Right-handed alpha
Helix 54	AF9	B	418	426	Right-handed alpha
Helix 55	AG1	B	430	445	Right-handed alpha
Helix 56	AG2	B	446	448	Right-handed 310
Helix 57	AG3	B	457	462	Right-handed alpha
Helix 58	AG4	B	467	471	Right-handed 310
Helix 59	AG5	B	475	485	Right-handed alpha
Helix 60	AG6	B	485	506	Right-handed alpha
Helix 61	AG7	B	525	546	Right-handed alpha
Helix 62	AG8	B	549	560	Right-handed alpha
Helix 63	AG9	B	560	569	Right-handed alpha
Helix 64	AH1	B	569	576	Right-handed alpha
Helix 65	AH2	B	577	582	Right-handed alpha
Helix 66	AH3	B	583	587	Right-handed 310
Helix 67	AH4	B	590	609	Right-handed alpha
Helix 68	AH5	B	612	623	Right-handed alpha
Helix 69	AH6	B	624	626	Right-handed 310
Helix 70	AH7	B	628	646	Right-handed alpha
Helix 71	AH8	B	649	661	Right-handed alpha
Helix 72	AH9	B	662	666	Right-handed 310
Helix 73	AI1	B	668	686	Right-handed alpha
Helix 74	AI2	B	687	700	Right-handed alpha
Helix 75	AI3	B	701	703	Right-handed 310
Helix 76	AI4	B	712	719	Right-handed alpha
Helix 77	AI5	B	725	734	Right-handed alpha
Helix 78	AI6	B	737	753	Right-handed alpha
Helix 79	AI7	B	764	778	Right-handed alpha
Helix 80	AI8	B	780	790	Right-handed alpha
Helix 81	AI9	B	790	801	Right-handed alpha
Helix 82	AJ1	B	802	804	Right-handed 310
Helix 83	AJ2	B	821	825	Right-handed alpha
Helix 84	AJ3	B	938	967	Right-handed alpha
Helix 85	AJ4	B	1023	1027	Right-handed 310
Helix 86	AJ5	B	1249	1253	Right-handed 310
Helix 87	AJ6	B	1272	1276	Right-handed 310
Helix 88	AJ7	C	111	127	Right-handed alpha
Helix 89	AJ8	C	137	170	Right-handed alpha
Helix 90	AJ9	C	175	216	Right-handed alpha
Helix 91	AK1	C	217	265	Right-handed alpha
Helix 92	AK2	C	299	322	Right-handed alpha
Helix 93	AK3	C	362	384	Right-handed alpha
Helix 94	AK4	C	421	446	Right-handed alpha
Helix 95	AK5	D	55	62	Right-handed alpha
Helix 96	AK6	D	74	100	Right-handed alpha
Helix 97	AK7	D	100	128	Right-handed alpha
Helix 98	AK8	D	130	152	Right-handed alpha
Helix 99	AK9	D	152	165	Right-handed alpha
Helix 100	AL1	D	166	205	Right-handed alpha
Helix 101	AL2	D	275	277	Right-handed 310
Helix 102	AL3	D	278	287	Right-handed alpha
Helix 103	AL4	D	293	297	Right-handed 310
Helix 104	AL5	D	301	322	Right-handed alpha
Helix 105	AL6	D	340	362	Right-handed alpha
Helix 106	AL7	D	365	369	Right-handed 310
Helix 107	AL8	D	373	383	Right-handed alpha
Helix 108	AL9	D	398	402	Right-handed 310
Helix 109	AM1	E	7	24	Right-handed alpha
Helix 110	AM2	E	26	44	Right-handed alpha
Helix 111	AM3	E	50	78	Right-handed alpha

There are 23 sheets in PDB entry 9TZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	A	7	11	parallel
Strand 3	B	829	831	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	96	first strand
Strand 2	A	18	27	anti-parallel
Strand 3	A	216	220	anti-parallel
Strand 4	A	140	144	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	105	113	anti-parallel
Strand 4	A	119	121	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	75	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	105	113	anti-parallel
Strand 4	A	125	128	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	223	226	anti-parallel
Strand 3	B	818	820	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	604	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	610	611	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	604	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	630	637	anti-parallel
Strand 5	A	679	683	anti-parallel
Strand 6	A	672	674	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	689	first strand
Strand 2	A	749	751	anti-parallel
Strand 3	A	757	759	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	34	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	49	56	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	89	92	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	154	156	anti-parallel
Strand 3	B	162	164	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	176	first strand
Strand 2	B	202	203	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	984	989	first strand
Strand 2	B	1354	1358	anti-parallel
Strand 3	B	1343	1348	anti-parallel
Strand 4	B	1335	1339	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	996	1001	first strand
Strand 2	B	1007	1012	anti-parallel
Strand 3	B	1017	1021	anti-parallel
Strand 4	B	1036	1038	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1045	1050	first strand
Strand 2	B	1056	1061	anti-parallel
Strand 3	B	1065	1071	anti-parallel
Strand 4	B	1082	1089	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1098	1101	first strand
Strand 2	B	1111	1116	anti-parallel
Strand 3	B	1120	1125	anti-parallel
Strand 4	B	1131	1136	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1144	1149	first strand
Strand 2	B	1155	1160	anti-parallel
Strand 3	B	1164	1169	anti-parallel
Strand 4	B	1174	1180	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1187	1192	first strand
Strand 2	B	1199	1204	anti-parallel
Strand 3	B	1209	1214	anti-parallel
Strand 4	B	1220	1225	anti-parallel
Strand 5	B	1298	1305	parallel
Strand 6	B	1288	1290	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1187	1192	first strand
Strand 2	B	1199	1204	anti-parallel
Strand 3	B	1209	1214	anti-parallel
Strand 4	B	1220	1225	anti-parallel
Strand 5	B	1298	1305	parallel
Strand 6	B	1293	1295	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1242	1248	first strand
Strand 2	B	1255	1260	anti-parallel
Strand 3	B	1265	1269	anti-parallel
Strand 4	B	1277	1278	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	279	first strand
Strand 2	C	282	284	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	331	first strand
Strand 2	C	338	341	anti-parallel
Strand 3	C	349	350	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	397	first strand
Strand 2	C	402	404	anti-parallel
Strand 3	C	412	414	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	260	262	anti-parallel
Strand 3	D	269	271	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TZ3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TZ3