Analysis of interatomic Contacts of Structural Units in PDB entry:
9U46


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U46 entry

There are 2 chains in PDB entry 9U46 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 62
A
 ASN 64PHE 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9U46. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
39 54Right-handed alpha
Helix 3
AA3
A
64 72Right-handed alpha
Helix 4
AA4
A
86 96Right-handed alpha
Helix 5
AA5
A
110 117Right-handed alpha
Helix 6
AA6
A
129 142Right-handed alpha
Helix 7
AA7
A
144 149Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9U46.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
32 35parallel
Strand 3
A
2 6parallel
Strand 4
A
100 104parallel
Strand 5
A
75 79parallel
Strand 6
A
119 122parallel
Strand 7
A
84 85parallel
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