Analysis of interatomic Contacts of Structural Units in PDB entry:
9U4L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U4L entry

There are 6 chains in PDB entry 9U4L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ARG 21VAL 89
A
 ARG 21VAL 89
B
 ARG 21VAL 89
C
 ARG 21VAL 89
E
 ARG 21VAL 89
F
 ARG 21VAL 89
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9U4L

There are 7 sheets in PDB entry 9U4L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
B
25 28parallel
Strand 3
C
25 28parallel
Strand 4
D
25 28parallel
Strand 5
E
25 28parallel
Strand 6
F
25 28parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
B
31 35parallel
Strand 3
C
31 35parallel
Strand 4
D
31 35parallel
Strand 5
E
31 35parallel
Strand 6
F
31 35parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
B
47 51parallel
Strand 3
C
47 51parallel
Strand 4
D
47 51parallel
Strand 5
E
47 51parallel
Strand 6
F
47 51parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 65first strand
Strand 2
B
54 65parallel
Strand 3
C
54 65parallel
Strand 4
D
54 65parallel
Strand 5
E
54 65parallel
Strand 6
F
54 65parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 77first strand
Strand 2
B
71 77parallel
Strand 3
C
71 77parallel
Strand 4
D
71 77parallel
Strand 5
E
71 77parallel
Strand 6
F
71 77parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
B
86 87parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 87first strand
Strand 2
F
86 87parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il