Analysis of interatomic Contacts of Structural Units in PDB entry:
9U58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U58 entry

There is 1 chain in PDB entry 9U58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4GLU 1467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9U58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
29 59Right-handed alpha
Helix 4
AA4
A
75 94Right-handed alpha
Helix 5
AA5
A
107 131Right-handed alpha
Helix 6
AA6
A
140 164Right-handed alpha
Helix 7
AA7
A
165 168Right-handed 310
Helix 8
AA8
A
169 192Right-handed alpha
Helix 9
AA9
A
226 231Right-handed 310
Helix 10
AB1
A
233 238Right-handed alpha
Helix 11
AB2
A
239 241Right-handed 310
Helix 12
AB3
A
242 252Right-handed alpha
Helix 13
AB4
A
267 284Right-handed alpha
Helix 14
AB5
A
289 299Right-handed alpha
Helix 15
AB6
A
300 316Right-handed alpha
Helix 16
AB7
A
317 332Right-handed alpha
Helix 17
AB8
A
335 337Right-handed 310
Helix 18
AB9
A
338 384Right-handed alpha
Helix 19
AC1
A
387 396Right-handed alpha
Helix 20
AC2
A
398 404Right-handed alpha
Helix 21
AC3
A
405 416Right-handed alpha
Helix 22
AC4
A
418 438Right-handed alpha
Helix 23
AC5
A
440 451Right-handed alpha
Helix 24
AC6
A
453 483Right-handed alpha
Helix 25
AC7
A
487 495Right-handed alpha
Helix 26
AC8
A
497 547Right-handed alpha
Helix 27
AC9
A
552 566Right-handed alpha
Helix 28
AD1
A
566 594Right-handed alpha
Helix 29
AD2
A
654 663Right-handed alpha
Helix 30
AD3
A
693 698Right-handed alpha
Helix 31
AD4
A
705 716Right-handed alpha
Helix 32
AD5
A
717 725Right-handed alpha
Helix 33
AD6
A
727 731Right-handed 310
Helix 34
AD7
A
734 738Right-handed 310
Helix 35
AD8
A
741 757Right-handed alpha
Helix 36
AD9
A
765 770Right-handed 310
Helix 37
AE1
A
771 782Right-handed alpha
Helix 38
AE2
A
801 805Right-handed 310
Helix 39
AE3
A
821 829Right-handed alpha
Helix 40
AE4
A
829 836Right-handed alpha
Helix 41
AE5
A
904 916Right-handed alpha
Helix 42
AE6
A
918 947Right-handed alpha
Helix 43
AE7
A
957 966Right-handed alpha
Helix 44
AE8
A
986 1001Right-handed alpha
Helix 45
AE9
A
1004 1011Right-handed alpha
Helix 46
AF1
A
1012 1030Right-handed alpha
Helix 47
AF2
A
1030 1056Right-handed alpha
Helix 48
AF3
A
1056 1092Right-handed alpha
Helix 49
AF4
A
1093 1112Right-handed alpha
Helix 50
AF5
A
1114 1165Right-handed alpha
Helix 51
AF6
A
1177 1185Right-handed alpha
Helix 52
AF7
A
1194 1199Right-handed alpha
Helix 53
AF8
A
1199 1218Right-handed alpha
Helix 54
AF9
A
1282 1290Right-handed alpha
Helix 55
AG1
A
1306 1310Right-handed 310
Helix 56
AG2
A
1311 1317Right-handed alpha
Helix 57
AG3
A
1333 1338Right-handed alpha
Helix 58
AG4
A
1344 1355Right-handed alpha
Helix 59
AG5
A
1357 1364Right-handed alpha
Helix 60
AG6
A
1366 1369Right-handed 310
Helix 61
AG7
A
1380 1396Right-handed alpha
Helix 62
AG8
A
1410 1425Right-handed alpha
Helix 63
AG9
A
1436 1440Right-handed 310
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There are 6 sheets in PDB entry 9U58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 639first strand
Strand 2
A
614 617anti-parallel
Strand 3
A
673 676anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
619 621first strand
Strand 2
A
632 635anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
760 762first strand
Strand 2
A
791 793parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1259 1265first strand
Strand 2
A
1243 1249anti-parallel
Strand 3
A
1297 1301anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1274 1276first strand
Strand 2
A
1446 1449parallel
Strand 3
A
1454 1458anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1331 1332first strand
Strand 2
A
1371 1372anti-parallel
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