Analysis of interatomic Contacts of Structural Units in PDB entry:
9U5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U5Z entry

There are 2 chains in PDB entry 9U5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 CYS 24LEU 752
E
 LYS 20VAL 1744
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9U5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
212 231Right-handed alpha
Helix 2
AA2
B
270 285Right-handed alpha
Helix 3
AA3
B
310 314Right-handed 310
Helix 4
AA4
B
315 324Right-handed alpha
Helix 5
AA5
B
328 333Right-handed alpha
Helix 6
AA6
B
338 351Right-handed alpha
Helix 7
AA7
B
385 396Right-handed alpha
Helix 8
AA8
B
419 427Right-handed alpha
Helix 9
AA9
B
446 450Right-handed 310
Helix 10
AB1
B
585 593Right-handed alpha
Helix 11
AB2
B
601 606Right-handed 310
Helix 12
AB3
B
634 640Right-handed alpha
Helix 13
AB4
B
641 645Right-handed 310
Helix 14
AB5
B
675 679Right-handed 310
Helix 15
AB6
B
735 743Right-handed alpha
Helix 16
AB7
E
74 78Right-handed 310
Helix 17
AB8
E
315 323Right-handed alpha
Helix 18
AB9
E
324 326Right-handed 310
Helix 19
AC1
E
534 538Right-handed 310
Helix 20
AC2
E
606 612Right-handed alpha
Helix 21
AC3
E
620 630Right-handed alpha
Helix 22
AC4
E
642 651Right-handed alpha
Helix 23
AC5
E
768 772Right-handed 310
Helix 24
AC6
E
1018 1031Right-handed alpha
Helix 25
AC7
E
1040 1056Right-handed alpha
Helix 26
AC8
E
1072 1083Right-handed alpha
Helix 27
AC9
E
1102 1107Right-handed alpha
Helix 28
AD1
E
1139 1154Right-handed alpha
Helix 29
AD2
E
1170 1182Right-handed alpha
Helix 30
AD3
E
1189 1201Right-handed alpha
Helix 31
AD4
E
1278 1287Right-handed alpha
Helix 32
AD5
E
1299 1308Right-handed alpha
Helix 33
AD6
E
1310 1317Right-handed alpha
Helix 34
AD7
E
1497 1506Right-handed alpha
Helix 35
AD8
E
1612 1618Right-handed alpha
Helix 36
AD9
E
1723 1740Right-handed alpha
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There are 36 sheets in PDB entry 9U5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
47 50anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
85 86anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
112 117anti-parallel
Strand 3
B
128 130anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 124first strand
Strand 2
B
143 145anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
B
172 176anti-parallel
Strand 3
B
188 190anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 184first strand
Strand 2
B
203 205anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 304first strand
Strand 2
B
292 297anti-parallel
Strand 3
B
253 259parallel
Strand 4
B
368 374parallel
Strand 5
B
408 414parallel
Strand 6
B
436 438parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 484first strand
Strand 2
B
492 496anti-parallel
Strand 3
B
501 504anti-parallel
Strand 4
B
563 567anti-parallel
Strand 5
B
534 539anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
611 612first strand
Strand 2
B
629 630anti-parallel
Strand 3
B
663 666anti-parallel
Strand 4
B
727 731anti-parallel
Strand 5
B
691 700anti-parallel
Strand 6
B
682 686anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
616 618first strand
Strand 2
B
624 626anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
80 85first strand
Strand 2
E
37 43anti-parallel
Strand 3
E
23 28anti-parallel
Strand 4
E
652 656anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 31first strand
Strand 2
E
132 134parallel
Strand 3
E
108 114anti-parallel
Strand 4
E
55 58anti-parallel
Strand 5
E
62 66anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 31first strand
Strand 2
E
132 134parallel
Strand 3
E
108 114anti-parallel
Strand 4
E
127 128anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
50 52first strand
Strand 2
E
71 73anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
140 145first strand
Strand 2
E
155 163anti-parallel
Strand 3
E
200 203anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
149 150first strand
Strand 2
E
227 233parallel
Strand 3
E
211 219anti-parallel
Strand 4
E
173 179anti-parallel
Strand 5
E
185 192anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
241 246first strand
Strand 2
E
262 270anti-parallel
Strand 3
E
309 314anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
252 254first strand
Strand 2
E
352 363parallel
Strand 3
E
337 346anti-parallel
Strand 4
E
278 288anti-parallel
Strand 5
E
292 295anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
252 254first strand
Strand 2
E
352 363parallel
Strand 3
E
337 346anti-parallel
Strand 4
E
278 288anti-parallel
Strand 5
E
301 305anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
368 370first strand
Strand 2
E
383 391anti-parallel
Strand 3
E
430 436anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
423 424first strand
Strand 2
E
402 405anti-parallel
Strand 3
E
444 450anti-parallel
Strand 4
E
457 462anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
474 477first strand
Strand 2
E
487 495anti-parallel
Strand 3
E
527 533anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
514 522first strand
Strand 2
E
504 511anti-parallel
Strand 3
E
540 549anti-parallel
Strand 4
E
552 561anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
588 589first strand
Strand 2
E
795 796anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
781 782first strand
Strand 2
E
598 605anti-parallel
Strand 3
E
805 813anti-parallel
Strand 4
E
819 821anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
786 788first strand
Strand 2
E
598 605anti-parallel
Strand 3
E
805 813anti-parallel
Strand 4
E
825 828anti-parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
834 838first strand
Strand 2
E
850 857anti-parallel
Strand 3
E
893 896anti-parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
834 838first strand
Strand 2
E
850 857anti-parallel
Strand 3
E
899 900anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
842 843first strand
Strand 2
E
925 933parallel
Strand 3
E
908 915anti-parallel
Strand 4
E
863 869anti-parallel
Strand 5
E
885 889anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
938 940first strand
Strand 2
E
1384 1386anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
944 947first strand
Strand 2
E
1377 1382anti-parallel
Strand 3
E
976 980anti-parallel
Strand 4
E
1355 1357anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
956 959first strand
Strand 2
E
1365 1368anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1324 1327first strand
Strand 2
E
1342 1345anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1397 1405first strand
Strand 2
E
1465 1474anti-parallel
Strand 3
E
1534 1542anti-parallel
Strand 4
E
1494 1496anti-parallel
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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1510 1511first strand
Strand 2
E
1522 1526anti-parallel
Strand 3
E
1484 1488anti-parallel
Strand 4
E
1552 1558anti-parallel
Strand 5
E
1568 1570anti-parallel
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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1700 1702first strand
Strand 2
E
1666 1669parallel
Strand 3
E
1641 1649anti-parallel
Strand 4
E
1627 1635anti-parallel
Strand 5
E
1682 1686anti-parallel
Strand 6
E
1708 1711anti-parallel
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