Analysis of interatomic Contacts of Structural Units in PDB entry:
9U67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U67 entry

There are 6 chains in PDB entry 9U67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 SER 29LEU 314
F
 VAL 52ASP 109
A
 SER 29LEU 314
B
 VAL 52ASP 109
C
 SER 29LEU 314
D
 VAL 52ASP 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9U67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
56 63Right-handed alpha
Helix 2
AA2
E
97 105Right-handed alpha
Helix 3
AA3
E
118 123Right-handed alpha
Helix 4
AA4
E
184 192Right-handed alpha
Helix 5
AA5
F
53 58Right-handed alpha
Helix 6
AA6
F
74 109Right-handed alpha
Helix 7
AA7
A
56 63Right-handed alpha
Helix 8
AA8
A
97 105Right-handed alpha
Helix 9
AA9
A
118 123Right-handed alpha
Helix 10
AB1
A
184 192Right-handed alpha
Helix 11
AB2
B
53 58Right-handed alpha
Helix 12
AB3
B
74 109Right-handed alpha
Helix 13
AB4
C
56 63Right-handed alpha
Helix 14
AB5
C
97 106Right-handed alpha
Helix 15
AB6
C
118 123Right-handed alpha
Helix 16
AB7
C
184 192Right-handed alpha
Helix 17
AB8
D
53 58Right-handed alpha
Helix 18
AB9
D
74 109Right-handed alpha
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There are 19 sheets in PDB entry 9U67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
41 43first strand
Strand 2
E
272 276parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
50 51first strand
Strand 2
E
79 81parallel
Strand 3
E
265 267parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
108 114first strand
Strand 2
E
254 259anti-parallel
Strand 3
E
172 181anti-parallel
Strand 4
E
226 234anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
148 150first strand
Strand 2
E
249 251anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
162 166first strand
Strand 2
E
239 244anti-parallel
Strand 3
E
199 202anti-parallel
Strand 4
E
207 210anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
280 281first strand
Strand 2
E
284 285anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
292 293first strand
Strand 2
E
305 306parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
A
272 276parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
79 81parallel
Strand 3
A
265 267parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 115first strand
Strand 2
A
253 259anti-parallel
Strand 3
A
173 181anti-parallel
Strand 4
A
226 234anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
249 251anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
239 244anti-parallel
Strand 3
A
199 202anti-parallel
Strand 4
A
207 210anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
279 281anti-parallel
Strand 3
A
300 301anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 43first strand
Strand 2
C
272 276parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 51first strand
Strand 2
C
79 81parallel
Strand 3
C
265 267parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 114first strand
Strand 2
C
254 258anti-parallel
Strand 3
C
173 181anti-parallel
Strand 4
C
226 234anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 150first strand
Strand 2
C
249 251anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 166first strand
Strand 2
C
239 244anti-parallel
Strand 3
C
199 202anti-parallel
Strand 4
C
207 210anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
280 281first strand
Strand 2
C
284 285anti-parallel
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