Analysis of interatomic Contacts of Structural Units in PDB entry:
9U7F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9U7F entry

There are 12 chains in PDB entry 9U7F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 104	LYS 569
B	THR 6	LYS 149
C	ASP 39	ILE 66
D	THR 104	LYS 569
E	THR 6	LYS 149
F	ASP 39	ILE 66
G	THR 104	LYS 569
H	THR 6	LYS 149
I	ASP 39	ILE 66
J	THR 104	LYS 569
K	THR 6	LYS 149
L	ASP 39	ILE 66

There are112 helices in PDB entry 9U7F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	105	115	Right-handed alpha
Helix 2	AA2	A	119	143	Right-handed alpha
Helix 3	AA3	A	150	177	Right-handed alpha
Helix 4	AA4	A	186	195	Right-handed alpha
Helix 5	AA5	A	196	215	Right-handed alpha
Helix 6	AA6	A	220	231	Right-handed alpha
Helix 7	AA7	A	234	239	Right-handed alpha
Helix 8	AA8	A	247	258	Right-handed alpha
Helix 9	AA9	A	259	284	Right-handed alpha
Helix 10	AB1	A	298	311	Right-handed alpha
Helix 11	AB2	A	322	332	Right-handed alpha
Helix 12	AB3	A	337	340	Right-handed 310
Helix 13	AB4	A	341	357	Right-handed alpha
Helix 14	AB5	A	358	360	Right-handed 310
Helix 15	AB6	A	367	381	Right-handed alpha
Helix 16	AB7	A	391	395	Right-handed 310
Helix 17	AB8	A	513	533	Right-handed alpha
Helix 18	AB9	A	537	569	Right-handed alpha
Helix 19	AC1	B	7	22	Right-handed alpha
Helix 20	AC2	B	29	41	Right-handed alpha
Helix 21	AC3	B	45	55	Right-handed alpha
Helix 22	AC4	B	65	75	Right-handed alpha
Helix 23	AC5	B	79	92	Right-handed alpha
Helix 24	AC6	B	103	111	Right-handed alpha
Helix 25	AC7	B	118	130	Right-handed alpha
Helix 26	AC8	B	139	149	Right-handed alpha
Helix 27	AC9	C	42	62	Right-handed alpha
Helix 28	AD1	C	63	65	Right-handed 310
Helix 29	AD2	D	105	115	Right-handed alpha
Helix 30	AD3	D	119	143	Right-handed alpha
Helix 31	AD4	D	150	177	Right-handed alpha
Helix 32	AD5	D	186	195	Right-handed alpha
Helix 33	AD6	D	196	215	Right-handed alpha
Helix 34	AD7	D	220	231	Right-handed alpha
Helix 35	AD8	D	234	239	Right-handed alpha
Helix 36	AD9	D	247	258	Right-handed alpha
Helix 37	AE1	D	259	284	Right-handed alpha
Helix 38	AE2	D	298	311	Right-handed alpha
Helix 39	AE3	D	322	332	Right-handed alpha
Helix 40	AE4	D	337	340	Right-handed 310
Helix 41	AE5	D	341	357	Right-handed alpha
Helix 42	AE6	D	358	360	Right-handed 310
Helix 43	AE7	D	367	381	Right-handed alpha
Helix 44	AE8	D	391	395	Right-handed 310
Helix 45	AE9	D	513	533	Right-handed alpha
Helix 46	AF1	D	537	569	Right-handed alpha
Helix 47	AF2	E	7	22	Right-handed alpha
Helix 48	AF3	E	29	41	Right-handed alpha
Helix 49	AF4	E	45	55	Right-handed alpha
Helix 50	AF5	E	65	75	Right-handed alpha
Helix 51	AF6	E	79	92	Right-handed alpha
Helix 52	AF7	E	103	111	Right-handed alpha
Helix 53	AF8	E	118	130	Right-handed alpha
Helix 54	AF9	E	139	149	Right-handed alpha
Helix 55	AG1	F	42	62	Right-handed alpha
Helix 56	AG2	F	63	65	Right-handed 310
Helix 57	AG3	G	105	115	Right-handed alpha
Helix 58	AG4	G	119	143	Right-handed alpha
Helix 59	AG5	G	150	177	Right-handed alpha
Helix 60	AG6	G	186	195	Right-handed alpha
Helix 61	AG7	G	196	215	Right-handed alpha
Helix 62	AG8	G	220	231	Right-handed alpha
Helix 63	AG9	G	234	239	Right-handed alpha
Helix 64	AH1	G	247	258	Right-handed alpha
Helix 65	AH2	G	259	284	Right-handed alpha
Helix 66	AH3	G	298	311	Right-handed alpha
Helix 67	AH4	G	322	332	Right-handed alpha
Helix 68	AH5	G	337	340	Right-handed 310
Helix 69	AH6	G	341	357	Right-handed alpha
Helix 70	AH7	G	358	360	Right-handed 310
Helix 71	AH8	G	367	381	Right-handed alpha
Helix 72	AH9	G	391	395	Right-handed 310
Helix 73	AI1	G	513	533	Right-handed alpha
Helix 74	AI2	G	537	569	Right-handed alpha
Helix 75	AI3	H	7	22	Right-handed alpha
Helix 76	AI4	H	29	41	Right-handed alpha
Helix 77	AI5	H	45	55	Right-handed alpha
Helix 78	AI6	H	65	75	Right-handed alpha
Helix 79	AI7	H	79	92	Right-handed alpha
Helix 80	AI8	H	103	111	Right-handed alpha
Helix 81	AI9	H	118	130	Right-handed alpha
Helix 82	AJ1	H	139	149	Right-handed alpha
Helix 83	AJ2	I	42	62	Right-handed alpha
Helix 84	AJ3	I	63	65	Right-handed 310
Helix 85	AJ4	J	105	115	Right-handed alpha
Helix 86	AJ5	J	119	143	Right-handed alpha
Helix 87	AJ6	J	150	177	Right-handed alpha
Helix 88	AJ7	J	186	195	Right-handed alpha
Helix 89	AJ8	J	196	215	Right-handed alpha
Helix 90	AJ9	J	220	231	Right-handed alpha
Helix 91	AK1	J	234	239	Right-handed alpha
Helix 92	AK2	J	247	258	Right-handed alpha
Helix 93	AK3	J	259	284	Right-handed alpha
Helix 94	AK4	J	298	311	Right-handed alpha
Helix 95	AK5	J	322	332	Right-handed alpha
Helix 96	AK6	J	337	340	Right-handed 310
Helix 97	AK7	J	341	357	Right-handed alpha
Helix 98	AK8	J	358	360	Right-handed 310
Helix 99	AK9	J	367	381	Right-handed alpha
Helix 100	AL1	J	391	395	Right-handed 310
Helix 101	AL2	J	513	533	Right-handed alpha
Helix 102	AL3	J	537	569	Right-handed alpha
Helix 103	AL4	K	7	22	Right-handed alpha
Helix 104	AL5	K	29	41	Right-handed alpha
Helix 105	AL6	K	45	55	Right-handed alpha
Helix 106	AL7	K	65	75	Right-handed alpha
Helix 107	AL8	K	79	92	Right-handed alpha
Helix 108	AL9	K	103	111	Right-handed alpha
Helix 109	AM1	K	118	130	Right-handed alpha
Helix 110	AM2	K	139	149	Right-handed alpha
Helix 111	AM3	L	42	62	Right-handed alpha
Helix 112	AM4	L	63	65	Right-handed 310

There are 4 sheets in PDB entry 9U7F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	102	first strand
Strand 2	B	136	138	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	102	first strand
Strand 2	E	136	138	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	102	first strand
Strand 2	H	136	138	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	100	102	first strand
Strand 2	K	136	138	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9U7F

Analysis of interatomic Contacts of Structural Units in PDB entry:
9U7F