Analysis of interatomic Contacts of Structural Units in PDB entry:
9U82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U82 entry

There are 2 chains in PDB entry 9U82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 448
B
 MET 1SER 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9U82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 29Right-handed alpha
Helix 2
AA2
A
32 72Right-handed alpha
Helix 3
AA3
A
81 92Right-handed alpha
Helix 4
AA4
A
95 113Right-handed alpha
Helix 5
AA5
A
122 125Right-handed 310
Helix 6
AA6
A
126 141Right-handed alpha
Helix 7
AA7
A
142 164Right-handed alpha
Helix 8
AA8
A
164 171Right-handed alpha
Helix 9
AA9
A
181 201Right-handed alpha
Helix 10
AB1
A
210 219Right-handed alpha
Helix 11
AB2
A
220 222Right-handed 310
Helix 12
AB3
A
223 239Right-handed alpha
Helix 13
AB4
A
242 287Right-handed alpha
Helix 14
AB5
A
296 302Right-handed 310
Helix 15
AB6
A
303 324Right-handed alpha
Helix 16
AB7
A
337 341Right-handed 310
Helix 17
AB8
A
342 349Right-handed alpha
Helix 18
AB9
A
352 374Right-handed alpha
Helix 19
AC1
A
374 385Right-handed alpha
Helix 20
AC2
A
403 415Right-handed alpha
Helix 21
AC3
A
417 448Right-handed alpha
Helix 22
AC4
B
2 29Right-handed alpha
Helix 23
AC5
B
32 72Right-handed alpha
Helix 24
AC6
B
82 92Right-handed alpha
Helix 25
AC7
B
95 113Right-handed alpha
Helix 26
AC8
B
122 125Right-handed 310
Helix 27
AC9
B
126 141Right-handed alpha
Helix 28
AD1
B
142 164Right-handed alpha
Helix 29
AD2
B
164 171Right-handed alpha
Helix 30
AD3
B
181 201Right-handed alpha
Helix 31
AD4
B
210 219Right-handed alpha
Helix 32
AD5
B
220 222Right-handed 310
Helix 33
AD6
B
223 239Right-handed alpha
Helix 34
AD7
B
242 287Right-handed alpha
Helix 35
AD8
B
296 302Right-handed 310
Helix 36
AD9
B
303 324Right-handed alpha
Helix 37
AE1
B
338 349Right-handed alpha
Helix 38
AE2
B
352 374Right-handed alpha
Helix 39
AE3
B
374 385Right-handed alpha
Helix 40
AE4
B
403 415Right-handed alpha
Helix 41
AE5
B
417 448Right-handed alpha
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There are 4 sheets in PDB entry 9U82. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
329 330parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 120first strand
Strand 2
A
292 294parallel
Strand 3
A
177 178parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
B
329 330parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 120first strand
Strand 2
B
292 294parallel
Strand 3
B
177 178parallel
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