Analysis of interatomic Contacts of Structural Units in PDB entry:
9U9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U9I entry

There are 4 chains in PDB entry 9U9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 11VAL 566
E
 LYS 54SER 612
S
 MET 1LEU 136
M
 MET 1THR 136
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 9U9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 24Right-handed alpha
Helix 2
AA2
B
27 42Right-handed alpha
Helix 3
AA3
B
52 57Right-handed alpha
Helix 4
AA4
B
61 75Right-handed alpha
Helix 5
AA5
B
82 93Right-handed alpha
Helix 6
AA6
B
98 112Right-handed alpha
Helix 7
AA7
B
122 129Right-handed alpha
Helix 8
AA8
B
134 143Right-handed alpha
Helix 9
AA9
B
144 147Right-handed 310
Helix 10
AB1
B
157 167Right-handed alpha
Helix 11
AB2
B
168 170Right-handed 310
Helix 12
AB3
B
174 188Right-handed alpha
Helix 13
AB4
B
189 191Right-handed 310
Helix 14
AB5
B
196 207Right-handed alpha
Helix 15
AB6
B
211 222Right-handed alpha
Helix 16
AB7
B
223 225Right-handed 310
Helix 17
AB8
B
229 241Right-handed alpha
Helix 18
AB9
B
242 246Right-handed 310
Helix 19
AC1
B
248 263Right-handed alpha
Helix 20
AC2
B
266 284Right-handed alpha
Helix 21
AC3
B
289 305Right-handed alpha
Helix 22
AC4
B
311 318Right-handed 310
Helix 23
AC5
B
325 340Right-handed alpha
Helix 24
AC6
B
345 358Right-handed alpha
Helix 25
AC7
B
361 379Right-handed alpha
Helix 26
AC8
B
382 393Right-handed alpha
Helix 27
AC9
B
397 410Right-handed alpha
Helix 28
AD1
B
412 416Right-handed 310
Helix 29
AD2
B
422 426Right-handed 310
Helix 30
AD3
B
432 446Right-handed alpha
Helix 31
AD4
B
452 463Right-handed alpha
Helix 32
AD5
B
469 487Right-handed alpha
Helix 33
AD6
B
491 504Right-handed alpha
Helix 34
AD7
B
511 525Right-handed alpha
Helix 35
AD8
B
525 532Right-handed alpha
Helix 36
AD9
B
552 559Right-handed alpha
Helix 37
AE1
E
56 66Right-handed alpha
Helix 38
AE2
E
74 85Right-handed alpha
Helix 39
AE3
E
92 99Right-handed alpha
Helix 40
AE4
E
111 123Right-handed alpha
Helix 41
AE5
E
129 143Right-handed alpha
Helix 42
AE6
E
148 158Right-handed alpha
Helix 43
AE7
E
169 175Right-handed alpha
Helix 44
AE8
E
183 198Right-handed alpha
Helix 45
AE9
E
207 215Right-handed alpha
Helix 46
AF1
E
219 230Right-handed alpha
Helix 47
AF2
E
231 235Right-handed 310
Helix 48
AF3
E
238 242Right-handed 310
Helix 49
AF4
E
243 254Right-handed alpha
Helix 50
AF5
E
271 285Right-handed alpha
Helix 51
AF6
E
290 295Right-handed alpha
Helix 52
AF7
E
295 301Right-handed alpha
Helix 53
AF8
E
311 323Right-handed alpha
Helix 54
AF9
E
338 343Right-handed alpha
Helix 55
AG1
E
349 365Right-handed alpha
Helix 56
AG2
E
369 373Right-handed 310
Helix 57
AG3
E
374 382Right-handed alpha
Helix 58
AG4
E
386 400Right-handed alpha
Helix 59
AG5
E
405 420Right-handed alpha
Helix 60
AG6
E
422 440Right-handed alpha
Helix 61
AG7
E
444 458Right-handed alpha
Helix 62
AG8
E
464 476Right-handed alpha
Helix 63
AG9
E
481 501Right-handed alpha
Helix 64
AH1
E
507 521Right-handed alpha
Helix 65
AH2
E
529 543Right-handed alpha
Helix 66
AH3
E
547 562Right-handed alpha
Helix 67
AH4
E
571 579Right-handed alpha
Helix 68
AH5
E
585 599Right-handed alpha
Helix 69
AH6
E
600 607Right-handed alpha
Helix 70
AH7
S
24 40Right-handed alpha
Helix 71
AH8
S
77 96Right-handed alpha
Helix 72
AH9
S
101 106Right-handed alpha
Helix 73
AI1
S
106 119Right-handed alpha
Helix 74
AI2
S
127 131Right-handed 310
Helix 75
AI3
M
28 39Right-handed alpha
Helix 76
AI4
M
75 94Right-handed alpha
Helix 77
AI5
M
98 105Right-handed alpha
Helix 78
AI6
M
105 116Right-handed alpha
Helix 79
AI7
M
126 134Right-handed alpha
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There are 3 sheets in PDB entry 9U9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
14 19first strand
Strand 2
S
2 8anti-parallel
Strand 3
S
65 71anti-parallel
Strand 4
S
56 62anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
14 18first strand
Strand 2
M
2 8anti-parallel
Strand 3
M
67 70anti-parallel
Strand 4
M
55 58anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
117 118first strand
Strand 2
M
121 122anti-parallel
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