Analysis of interatomic Contacts of Structural Units in PDB entry:
9U9Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9U9Z entry

There are 4 chains in PDB entry 9U9Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 25PRO 276
B
 TRP 27ILE 274
C
 GLN 2VAL 661
D
 SER 20HIS 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 9U9Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 36Right-handed alpha
Helix 2
AA2
A
38 48Right-handed alpha
Helix 3
AA3
A
54 61Right-handed alpha
Helix 4
AA4
A
61 70Right-handed alpha
Helix 5
AA5
A
82 114Right-handed alpha
Helix 6
AA6
A
114 130Right-handed alpha
Helix 7
AA7
A
132 145Right-handed alpha
Helix 8
AA8
A
146 173Right-handed alpha
Helix 9
AA9
A
175 186Right-handed alpha
Helix 10
AB1
A
188 196Right-handed alpha
Helix 11
AB2
A
197 227Right-handed alpha
Helix 12
AB3
A
234 243Right-handed alpha
Helix 13
AB4
A
245 275Right-handed alpha
Helix 14
AB5
B
28 36Right-handed alpha
Helix 15
AB6
B
38 47Right-handed alpha
Helix 16
AB7
B
54 59Right-handed alpha
Helix 17
AB8
B
82 114Right-handed alpha
Helix 18
AB9
B
114 130Right-handed alpha
Helix 19
AC1
B
132 144Right-handed alpha
Helix 20
AC2
B
152 160Right-handed alpha
Helix 21
AC3
B
160 173Right-handed alpha
Helix 22
AC4
B
175 185Right-handed alpha
Helix 23
AC5
B
188 224Right-handed alpha
Helix 24
AC6
B
235 240Right-handed alpha
Helix 25
AC7
B
248 274Right-handed alpha
Helix 26
AC8
C
48 57Right-handed alpha
Helix 27
AC9
C
94 107Right-handed alpha
Helix 28
AD1
C
111 125Right-handed alpha
Helix 29
AD2
C
143 155Right-handed alpha
Helix 30
AD3
C
172 188Right-handed alpha
Helix 31
AD4
C
233 238Right-handed alpha
Helix 32
AD5
C
241 266Right-handed alpha
Helix 33
AD6
C
288 290Right-handed 310
Helix 34
AD7
C
291 300Right-handed alpha
Helix 35
AD8
C
318 327Right-handed alpha
Helix 36
AD9
C
338 347Right-handed alpha
Helix 37
AE1
C
371 378Right-handed alpha
Helix 38
AE2
C
381 392Right-handed alpha
Helix 39
AE3
C
406 419Right-handed alpha
Helix 40
AE4
C
435 444Right-handed alpha
Helix 41
AE5
C
452 462Right-handed alpha
Helix 42
AE6
C
486 493Right-handed alpha
Helix 43
AE7
C
493 513Right-handed alpha
Helix 44
AE8
C
517 525Right-handed alpha
Helix 45
AE9
C
533 538Right-handed 310
Helix 46
AF1
C
570 584Right-handed alpha
Helix 47
AF2
C
592 601Right-handed alpha
Helix 48
AF3
C
602 614Right-handed alpha
Helix 49
AF4
C
618 623Right-handed 310
Helix 50
AF5
C
637 644Right-handed alpha
Helix 51
AF6
D
63 73Right-handed alpha
Helix 52
AF7
D
110 123Right-handed alpha
Helix 53
AF8
D
127 143Right-handed alpha
Helix 54
AF9
D
144 148Right-handed 310
Helix 55
AG1
D
156 171Right-handed alpha
Helix 56
AG2
D
186 204Right-handed alpha
Helix 57
AG3
D
214 221Right-handed alpha
Helix 58
AG4
D
249 256Right-handed alpha
Helix 59
AG5
D
260 272Right-handed alpha
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There are 8 sheets in PDB entry 9U9Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 11first strand
Strand 2
C
26 29anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 83first strand
Strand 2
C
160 163parallel
Strand 3
C
192 196parallel
Strand 4
C
39 42parallel
Strand 5
C
208 212parallel
Strand 6
C
220 225anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
282 284first strand
Strand 2
C
312 314parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 337first strand
Strand 2
C
481 485anti-parallel
Strand 3
C
356 362anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
399 400first strand
Strand 2
C
448 451parallel
Strand 3
C
367 370anti-parallel
Strand 4
C
466 467anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 48first strand
Strand 2
D
22 28anti-parallel
Strand 3
D
79 81anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 99first strand
Strand 2
D
177 179parallel
Strand 3
D
209 211parallel
Strand 4
D
55 57parallel
Strand 5
D
224 227parallel
Strand 6
D
239 241anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 84first strand
Strand 2
D
87 88anti-parallel
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