Analysis of interatomic Contacts of Structural Units in PDB entry:
9UA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UA0 entry

There are 4 chains in PDB entry 9UA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24GLU 278
B
 ALA 24ILE 274
C
 ASP 3ARG 266
D
 SER 20HIS 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 9UA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 47Right-handed alpha
Helix 2
AA2
A
54 61Right-handed alpha
Helix 3
AA3
A
61 70Right-handed alpha
Helix 4
AA4
A
82 98Right-handed alpha
Helix 5
AA5
A
102 110Right-handed alpha
Helix 6
AA6
A
114 121Right-handed alpha
Helix 7
AA7
A
121 129Right-handed alpha
Helix 8
AA8
A
135 145Right-handed alpha
Helix 9
AA9
A
146 165Right-handed alpha
Helix 10
AB1
A
166 173Right-handed alpha
Helix 11
AB2
A
175 185Right-handed alpha
Helix 12
AB3
A
188 196Right-handed alpha
Helix 13
AB4
A
197 224Right-handed alpha
Helix 14
AB5
A
225 227Right-handed 310
Helix 15
AB6
A
234 243Right-handed alpha
Helix 16
AB7
A
245 275Right-handed alpha
Helix 17
AB8
B
27 36Right-handed alpha
Helix 18
AB9
B
37 48Right-handed alpha
Helix 19
AC1
B
54 59Right-handed alpha
Helix 20
AC2
B
61 66Right-handed alpha
Helix 21
AC3
B
67 69Right-handed 310
Helix 22
AC4
B
82 103Right-handed alpha
Helix 23
AC5
B
106 114Right-handed alpha
Helix 24
AC6
B
114 130Right-handed alpha
Helix 25
AC7
B
132 144Right-handed alpha
Helix 26
AC8
B
146 158Right-handed alpha
Helix 27
AC9
B
160 169Right-handed alpha
Helix 28
AD1
B
175 185Right-handed alpha
Helix 29
AD2
B
188 196Right-handed alpha
Helix 30
AD3
B
196 223Right-handed alpha
Helix 31
AD4
B
235 243Right-handed alpha
Helix 32
AD5
B
245 274Right-handed alpha
Helix 33
AD6
C
47 57Right-handed alpha
Helix 34
AD7
C
94 107Right-handed alpha
Helix 35
AD8
C
111 125Right-handed alpha
Helix 36
AD9
C
143 155Right-handed alpha
Helix 37
AE1
C
170 187Right-handed alpha
Helix 38
AE2
C
233 238Right-handed alpha
Helix 39
AE3
C
245 262Right-handed alpha
Helix 40
AE4
D
63 72Right-handed alpha
Helix 41
AE5
D
110 123Right-handed alpha
Helix 42
AE6
D
127 143Right-handed alpha
Helix 43
AE7
D
144 148Right-handed 310
Helix 44
AE8
D
151 155Right-handed 310
Helix 45
AE9
D
156 171Right-handed alpha
Helix 46
AF1
D
186 204Right-handed alpha
Helix 47
AF2
D
214 219Right-handed alpha
Helix 48
AF3
D
249 254Right-handed alpha
Helix 49
AF4
D
256 272Right-handed alpha
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There are 5 sheets in PDB entry 9UA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 31first strand
Strand 2
C
6 10anti-parallel
Strand 3
C
65 66anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 17first strand
Strand 2
C
20 21anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 83first strand
Strand 2
C
159 162parallel
Strand 3
C
192 195parallel
Strand 4
C
39 40parallel
Strand 5
C
209 211parallel
Strand 6
C
222 224anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
41 47first strand
Strand 2
D
23 29anti-parallel
Strand 3
D
79 83anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 99first strand
Strand 2
D
175 179parallel
Strand 3
D
207 211parallel
Strand 4
D
53 57parallel
Strand 5
D
224 228parallel
Strand 6
D
236 241anti-parallel
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