Analysis of interatomic Contacts of Structural Units in PDB entry:
9UAP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UAP entry

There are 2 chains in PDB entry 9UAP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 25ARG 396
B
 THR 333VAL 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9UAP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 50Right-handed alpha
Helix 2
AA2
A
58 60Right-handed 310
Helix 3
AA3
A
61 78Right-handed alpha
Helix 4
AA4
A
78 88Right-handed alpha
Helix 5
AA5
A
93 129Right-handed alpha
Helix 6
AA6
A
129 136Right-handed alpha
Helix 7
AA7
A
139 168Right-handed alpha
Helix 8
AA8
A
180 184Right-handed 310
Helix 9
AA9
A
188 197Right-handed alpha
Helix 10
AB1
A
199 232Right-handed alpha
Helix 11
AB2
A
233 247Right-handed alpha
Helix 12
AB3
A
251 273Right-handed alpha
Helix 13
AB4
A
277 288Right-handed alpha
Helix 14
AB5
A
295 311Right-handed alpha
Helix 15
AB6
A
312 338Right-handed alpha
Helix 16
AB7
A
338 349Right-handed alpha
Helix 17
AB8
A
356 379Right-handed alpha
Helix 18
AB9
A
380 382Right-handed 310
Helix 19
AC1
A
383 395Right-handed alpha
Helix 20
AC2
B
334 356Right-handed alpha
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There are no sheets in PDB entry 9UAP
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