Analysis of interatomic Contacts of Structural Units in PDB entry:
9UDW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UDW entry

There are 2 chains in PDB entry 9UDW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 493
B
 MET 1SER 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 58 helices in PDB entry 9UDW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 13Right-handed alpha
Helix 2
AA2
A
17 41Right-handed alpha
Helix 3
AA3
A
42 44Right-handed 310
Helix 4
AA4
A
87 105Right-handed alpha
Helix 5
AA5
A
113 119Right-handed alpha
Helix 6
AA6
A
120 131Right-handed alpha
Helix 7
AA7
A
142 147Right-handed alpha
Helix 8
AA8
A
147 157Right-handed alpha
Helix 9
AA9
A
160 173Right-handed alpha
Helix 10
AB1
A
179 184Right-handed alpha
Helix 11
AB2
A
186 194Right-handed alpha
Helix 12
AB3
A
194 201Right-handed alpha
Helix 13
AB4
A
206 212Right-handed 310
Helix 14
AB5
A
213 228Right-handed alpha
Helix 15
AB6
A
287 292Right-handed alpha
Helix 16
AB7
A
296 299Right-handed 310
Helix 17
AB8
A
300 327Right-handed alpha
Helix 18
AB9
A
331 358Right-handed alpha
Helix 19
AC1
A
362 383Right-handed alpha
Helix 20
AC2
A
386 400Right-handed alpha
Helix 21
AC3
A
403 406Right-handed 310
Helix 22
AC4
A
407 416Right-handed alpha
Helix 23
AC5
A
425 433Right-handed alpha
Helix 24
AC6
A
435 441Right-handed alpha
Helix 25
AC7
A
441 455Right-handed alpha
Helix 26
AC8
A
456 458Right-handed 310
Helix 27
AC9
A
459 474Right-handed alpha
Helix 28
AD1
A
479 485Right-handed alpha
Helix 29
AD2
A
488 492Right-handed 310
Helix 30
AD3
B
6 13Right-handed alpha
Helix 31
AD4
B
17 41Right-handed alpha
Helix 32
AD5
B
42 44Right-handed 310
Helix 33
AD6
B
87 105Right-handed alpha
Helix 34
AD7
B
113 119Right-handed alpha
Helix 35
AD8
B
120 131Right-handed alpha
Helix 36
AD9
B
142 147Right-handed alpha
Helix 37
AE1
B
147 157Right-handed alpha
Helix 38
AE2
B
160 173Right-handed alpha
Helix 39
AE3
B
179 184Right-handed alpha
Helix 40
AE4
B
186 194Right-handed alpha
Helix 41
AE5
B
194 201Right-handed alpha
Helix 42
AE6
B
206 212Right-handed 310
Helix 43
AE7
B
213 228Right-handed alpha
Helix 44
AE8
B
287 292Right-handed alpha
Helix 45
AE9
B
296 299Right-handed 310
Helix 46
AF1
B
300 327Right-handed alpha
Helix 47
AF2
B
331 358Right-handed alpha
Helix 48
AF3
B
362 383Right-handed alpha
Helix 49
AF4
B
386 400Right-handed alpha
Helix 50
AF5
B
403 406Right-handed 310
Helix 51
AF6
B
407 416Right-handed alpha
Helix 52
AF7
B
425 433Right-handed alpha
Helix 53
AF8
B
435 441Right-handed alpha
Helix 54
AF9
B
441 455Right-handed alpha
Helix 55
AG1
B
456 458Right-handed 310
Helix 56
AG2
B
459 474Right-handed alpha
Helix 57
AG3
B
479 485Right-handed alpha
Helix 58
AG4
B
488 492Right-handed 310
Back to top of page
There are no sheets in PDB entry 9UDW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il