Analysis of interatomic Contacts of Structural Units in PDB entry:
9UDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UDX entry

There are 2 chains in PDB entry 9UDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 499
B
 MET 1LYS 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 9UDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 15Right-handed alpha
Helix 2
AA2
A
17 41Right-handed alpha
Helix 3
AA3
A
45 50Right-handed alpha
Helix 4
AA4
A
75 79Right-handed 310
Helix 5
AA5
A
80 82Right-handed 310
Helix 6
AA6
A
83 105Right-handed alpha
Helix 7
AA7
A
107 112Right-handed alpha
Helix 8
AA8
A
113 134Right-handed alpha
Helix 9
AA9
A
144 153Right-handed alpha
Helix 10
AB1
A
160 164Right-handed 310
Helix 11
AB2
A
166 172Right-handed alpha
Helix 12
AB3
A
176 184Right-handed alpha
Helix 13
AB4
A
186 199Right-handed alpha
Helix 14
AB5
A
207 210Right-handed 310
Helix 15
AB6
A
211 228Right-handed alpha
Helix 16
AB7
A
288 292Right-handed 310
Helix 17
AB8
A
304 325Right-handed alpha
Helix 18
AB9
A
332 357Right-handed alpha
Helix 19
AC1
A
361 371Right-handed alpha
Helix 20
AC2
A
372 382Right-handed alpha
Helix 21
AC3
A
387 399Right-handed alpha
Helix 22
AC4
A
402 411Right-handed alpha
Helix 23
AC5
A
419 423Right-handed 310
Helix 24
AC6
A
431 446Right-handed alpha
Helix 25
AC7
A
447 455Right-handed alpha
Helix 26
AC8
A
460 474Right-handed alpha
Helix 27
AC9
A
477 494Right-handed alpha
Helix 28
AD1
B
6 15Right-handed alpha
Helix 29
AD2
B
17 41Right-handed alpha
Helix 30
AD3
B
45 50Right-handed alpha
Helix 31
AD4
B
75 79Right-handed 310
Helix 32
AD5
B
80 82Right-handed 310
Helix 33
AD6
B
83 105Right-handed alpha
Helix 34
AD7
B
107 112Right-handed alpha
Helix 35
AD8
B
113 134Right-handed alpha
Helix 36
AD9
B
144 153Right-handed alpha
Helix 37
AE1
B
160 164Right-handed 310
Helix 38
AE2
B
166 172Right-handed alpha
Helix 39
AE3
B
176 184Right-handed alpha
Helix 40
AE4
B
186 199Right-handed alpha
Helix 41
AE5
B
207 210Right-handed 310
Helix 42
AE6
B
211 228Right-handed alpha
Helix 43
AE7
B
288 292Right-handed 310
Helix 44
AE8
B
304 325Right-handed alpha
Helix 45
AE9
B
332 357Right-handed alpha
Helix 46
AF1
B
361 371Right-handed alpha
Helix 47
AF2
B
372 382Right-handed alpha
Helix 48
AF3
B
387 399Right-handed alpha
Helix 49
AF4
B
402 411Right-handed alpha
Helix 50
AF5
B
419 423Right-handed 310
Helix 51
AF6
B
431 446Right-handed alpha
Helix 52
AF7
B
447 455Right-handed alpha
Helix 53
AF8
B
460 474Right-handed alpha
Helix 54
AF9
B
477 494Right-handed alpha
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There are no sheets in PDB entry 9UDX
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