Analysis of interatomic Contacts of Structural Units in PDB entry:
9UE3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UE3 entry

There is 1 chain in PDB entry 9UE3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 38	ASP 1302

There are 22 helices in PDB entry 9UE3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	47	Right-handed 310
Helix 2	AA2	A	254	259	Right-handed alpha
Helix 3	AA3	A	456	459	Right-handed 310
Helix 4	AA4	A	489	499	Right-handed alpha
Helix 5	AA5	A	863	868	Right-handed alpha
Helix 6	AA6	A	872	880	Right-handed alpha
Helix 7	AA7	A	882	908	Right-handed alpha
Helix 8	AA8	A	911	918	Right-handed alpha
Helix 9	AA9	A	919	924	Right-handed alpha
Helix 10	AB1	A	930	934	Right-handed 310
Helix 11	AB2	A	943	951	Right-handed alpha
Helix 12	AB3	A	962	971	Right-handed alpha
Helix 13	AB4	A	995	1002	Right-handed alpha
Helix 14	AB5	A	1010	1028	Right-handed alpha
Helix 15	AB6	A	1041	1054	Right-handed alpha
Helix 16	AB7	A	1063	1082	Right-handed alpha
Helix 17	AB8	A	1093	1113	Right-handed alpha
Helix 18	AB9	A	1114	1123	Right-handed alpha
Helix 19	AC1	A	1124	1126	Right-handed 310
Helix 20	AC2	A	1134	1142	Right-handed alpha
Helix 21	AC3	A	1143	1190	Right-handed alpha
Helix 22	AC4	A	1281	1283	Right-handed 310

There are 13 sheets in PDB entry 9UE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	299	first strand
Strand 2	A	472	477	anti-parallel
Strand 3	A	480	486	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	311	first strand
Strand 2	A	462	468	anti-parallel
Strand 3	A	342	346	anti-parallel
Strand 4	A	425	428	anti-parallel
Strand 5	A	432	435	anti-parallel
Strand 6	A	438	442	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	322	first strand
Strand 2	A	446	454	anti-parallel
Strand 3	A	354	355	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	322	first strand
Strand 2	A	446	454	anti-parallel
Strand 3	A	360	366	anti-parallel
Strand 4	A	371	377	anti-parallel
Strand 5	A	402	406	anti-parallel
Strand 6	A	411	417	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	511	first strand
Strand 2	A	743	749	anti-parallel
Strand 3	A	752	758	anti-parallel
Strand 4	A	777	780	anti-parallel
Strand 5	A	769	772	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	523	first strand
Strand 2	A	690	694	parallel
Strand 3	A	697	706	anti-parallel
Strand 4	A	734	738	anti-parallel
Strand 5	A	723	727	anti-parallel
Strand 6	A	715	717	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	552	first strand
Strand 2	A	531	544	anti-parallel
Strand 3	A	576	587	parallel
Strand 4	A	652	670	parallel
Strand 5	A	625	632	anti-parallel
Strand 6	A	570	571	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	557	559	first strand
Strand 2	A	531	544	anti-parallel
Strand 3	A	576	587	parallel
Strand 4	A	652	670	parallel
Strand 5	A	640	647	anti-parallel
Strand 6	A	605	609	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	803	807	first strand
Strand 2	A	810	813	anti-parallel
Strand 3	A	818	820	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	837	841	first strand
Strand 2	A	1230	1236	anti-parallel
Strand 3	A	1257	1261	anti-parallel
Strand 4	A	1267	1271	anti-parallel
Strand 5	A	1278	1279	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	844	854	first strand
Strand 2	A	1217	1227	anti-parallel
Strand 3	A	1205	1214	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	860	862	first strand
Strand 2	A	1005	1007	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1285	1288	first strand
Strand 2	A	1248	1252	anti-parallel
Strand 3	A	1239	1242	anti-parallel
Strand 4	A	1296	1299	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UE3

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UE3