Analysis of interatomic Contacts of Structural Units in PDB entry:
9UE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UE5 entry

There is 1 chain in PDB entry 9UE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLY 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9UE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
16 20Right-handed 310
Helix 3
AA3
A
21 30Right-handed alpha
Helix 4
AA4
A
41 44Right-handed 310
Helix 5
AA5
A
65 77Right-handed alpha
Helix 6
AA6
A
95 104Right-handed alpha
Helix 7
AA7
A
119 126Right-handed alpha
Helix 8
AA8
A
141 154Right-handed alpha
Helix 9
AA9
A
193 198Right-handed 310
Helix 10
AB1
A
200 220Right-handed alpha
Helix 11
AB2
A
221 224Right-handed 310
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There are 3 sheets in PDB entry 9UE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
4 9parallel
Strand 3
A
107 111parallel
Strand 4
A
84 87parallel
Strand 5
A
129 132parallel
Strand 6
A
92 93parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
63 64anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
190 191anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il