Analysis of interatomic Contacts of Structural Units in PDB entry:
9UEE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UEE entry

There are 4 chains in PDB entry 9UEE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PRO 336
B	MET 1	PRO 336
C	MET 1	PRO 336
D	MET 1	LYS 322

There are 43 helices in PDB entry 9UEE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	53	Right-handed alpha
Helix 2	AA2	A	105	109	Right-handed 310
Helix 3	AA3	A	133	135	Right-handed 310
Helix 4	AA4	A	145	153	Right-handed alpha
Helix 5	AA5	A	156	167	Right-handed alpha
Helix 6	AA6	A	180	193	Right-handed alpha
Helix 7	AA7	A	203	213	Right-handed alpha
Helix 8	AA8	A	240	250	Right-handed alpha
Helix 9	AA9	A	271	277	Right-handed alpha
Helix 10	AB1	A	288	302	Right-handed alpha
Helix 11	AB2	A	315	325	Right-handed alpha
Helix 12	AB3	B	45	53	Right-handed alpha
Helix 13	AB4	B	105	109	Right-handed 310
Helix 14	AB5	B	133	135	Right-handed 310
Helix 15	AB6	B	145	153	Right-handed alpha
Helix 16	AB7	B	156	166	Right-handed alpha
Helix 17	AB8	B	180	194	Right-handed alpha
Helix 18	AB9	B	203	213	Right-handed alpha
Helix 19	AC1	B	240	250	Right-handed alpha
Helix 20	AC2	B	271	277	Right-handed alpha
Helix 21	AC3	B	288	301	Right-handed alpha
Helix 22	AC4	B	315	325	Right-handed alpha
Helix 23	AC5	C	44	53	Right-handed alpha
Helix 24	AC6	C	98	104	Right-handed alpha
Helix 25	AC7	C	105	113	Right-handed 310
Helix 26	AC8	C	145	153	Right-handed alpha
Helix 27	AC9	C	156	167	Right-handed alpha
Helix 28	AD1	C	180	193	Right-handed alpha
Helix 29	AD2	C	203	213	Right-handed alpha
Helix 30	AD3	C	240	250	Right-handed alpha
Helix 31	AD4	C	271	277	Right-handed alpha
Helix 32	AD5	C	288	301	Right-handed alpha
Helix 33	AD6	C	315	325	Right-handed alpha
Helix 34	AD7	D	45	53	Right-handed alpha
Helix 35	AD8	D	98	103	Right-handed alpha
Helix 36	AD9	D	145	153	Right-handed alpha
Helix 37	AE1	D	156	166	Right-handed alpha
Helix 38	AE2	D	180	194	Right-handed alpha
Helix 39	AE3	D	203	213	Right-handed alpha
Helix 40	AE4	D	240	250	Right-handed alpha
Helix 41	AE5	D	271	277	Right-handed alpha
Helix 42	AE6	D	288	301	Right-handed alpha
Helix 43	AE7	D	315	325	Right-handed alpha

There are 20 sheets in PDB entry 9UEE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	25	first strand
Strand 2	A	6	13	anti-parallel
Strand 3	A	61	62	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	34	42	anti-parallel
Strand 3	A	66	74	anti-parallel
Strand 4	A	86	89	anti-parallel
Strand 5	A	137	139	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	34	42	anti-parallel
Strand 3	A	331	335	anti-parallel
Strand 4	A	308	312	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	120	121	parallel

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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	219	first strand
Strand 2	A	196	200	parallel
Strand 3	A	173	177	parallel
Strand 4	A	231	236	parallel
Strand 5	A	251	259	parallel
Strand 6	A	280	282	parallel
Strand 7	C	280	282	anti-parallel
Strand 8	C	251	258	parallel
Strand 9	C	231	236	parallel
Strand 10	C	173	177	parallel
Strand 11	C	196	200	parallel
Strand 12	C	217	219	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	270	first strand
Strand 2	C	266	270	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	25	first strand
Strand 2	B	6	13	anti-parallel
Strand 3	B	61	62	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	34	42	anti-parallel
Strand 3	B	66	74	anti-parallel
Strand 4	B	86	89	anti-parallel
Strand 5	B	137	139	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	34	42	anti-parallel
Strand 3	B	333	335	anti-parallel
Strand 4	B	310	312	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	117	first strand
Strand 2	B	120	121	parallel

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There are 12 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	219	first strand
Strand 2	B	196	200	parallel
Strand 3	B	173	177	parallel
Strand 4	B	231	236	parallel
Strand 5	B	251	259	parallel
Strand 6	B	280	282	parallel
Strand 7	D	280	282	anti-parallel
Strand 8	D	251	259	parallel
Strand 9	D	231	236	parallel
Strand 10	D	173	177	parallel
Strand 11	D	196	200	parallel
Strand 12	D	217	219	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	270	first strand
Strand 2	D	266	270	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	25	first strand
Strand 2	C	6	13	anti-parallel
Strand 3	C	61	62	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	34	42	anti-parallel
Strand 3	C	66	74	anti-parallel
Strand 4	C	86	89	anti-parallel
Strand 5	C	137	139	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	131	first strand
Strand 2	C	34	42	anti-parallel
Strand 3	C	331	335	anti-parallel
Strand 4	C	308	312	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	C	120	121	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	25	first strand
Strand 2	D	6	13	anti-parallel
Strand 3	D	61	62	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	131	first strand
Strand 2	D	34	42	anti-parallel
Strand 3	D	66	73	anti-parallel
Strand 4	D	86	89	anti-parallel
Strand 5	D	137	139	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	131	first strand
Strand 2	D	34	42	anti-parallel
Strand 3	D	333	335	anti-parallel
Strand 4	D	310	312	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	116	117	first strand
Strand 2	D	120	121	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UEE

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UEE