Analysis of interatomic Contacts of Structural Units in PDB entry:
9UF7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UF7 entry

There are 2 chains in PDB entry 9UF7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6GLY 455
B
 LYS 6GLY 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9UF7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 35Right-handed alpha
Helix 2
AA2
A
44 52Right-handed alpha
Helix 3
AA3
A
53 55Right-handed 310
Helix 4
AA4
A
80 84Right-handed 310
Helix 5
AA5
A
85 87Right-handed 310
Helix 6
AA6
A
88 99Right-handed alpha
Helix 7
AA7
A
99 111Right-handed alpha
Helix 8
AA8
A
122 131Right-handed alpha
Helix 9
AA9
A
141 149Right-handed alpha
Helix 10
AB1
A
162 168Right-handed alpha
Helix 11
AB2
A
184 192Right-handed 310
Helix 12
AB3
A
200 211Right-handed alpha
Helix 13
AB4
A
219 235Right-handed alpha
Helix 14
AB5
A
254 263Right-handed alpha
Helix 15
AB6
A
281 296Right-handed alpha
Helix 16
AB7
A
311 316Right-handed alpha
Helix 17
AB8
A
319 325Right-handed alpha
Helix 18
AB9
A
336 343Right-handed alpha
Helix 19
AC1
A
354 364Right-handed alpha
Helix 20
AC2
A
374 386Right-handed alpha
Helix 21
AC3
A
403 416Right-handed alpha
Helix 22
AC4
A
419 437Right-handed alpha
Helix 23
AC5
A
440 455Right-handed alpha
Helix 24
AC6
B
18 35Right-handed alpha
Helix 25
AC7
B
44 52Right-handed alpha
Helix 26
AC8
B
53 55Right-handed 310
Helix 27
AC9
B
80 84Right-handed 310
Helix 28
AD1
B
85 87Right-handed 310
Helix 29
AD2
B
88 99Right-handed alpha
Helix 30
AD3
B
99 111Right-handed alpha
Helix 31
AD4
B
122 131Right-handed alpha
Helix 32
AD5
B
141 149Right-handed alpha
Helix 33
AD6
B
162 168Right-handed alpha
Helix 34
AD7
B
181 192Right-handed 310
Helix 35
AD8
B
200 211Right-handed alpha
Helix 36
AD9
B
219 235Right-handed alpha
Helix 37
AE1
B
254 263Right-handed alpha
Helix 38
AE2
B
281 296Right-handed alpha
Helix 39
AE3
B
311 316Right-handed alpha
Helix 40
AE4
B
319 325Right-handed alpha
Helix 41
AE5
B
336 343Right-handed alpha
Helix 42
AE6
B
354 364Right-handed alpha
Helix 43
AE7
B
374 386Right-handed alpha
Helix 44
AE8
B
403 416Right-handed alpha
Helix 45
AE9
B
419 437Right-handed alpha
Helix 46
AF1
B
440 455Right-handed alpha
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There are 6 sheets in PDB entry 9UF7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
38 43parallel
Strand 3
A
10 14parallel
Strand 4
A
114 117parallel
Strand 5
A
133 138parallel
Strand 6
A
213 216parallel
Strand 7
A
238 240parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
198 199anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 331first strand
Strand 2
A
299 302parallel
Strand 3
A
269 273parallel
Strand 4
A
346 351parallel
Strand 5
A
367 370parallel
Strand 6
A
392 393parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 65first strand
Strand 2
B
38 43parallel
Strand 3
B
10 14parallel
Strand 4
B
114 117parallel
Strand 5
B
133 138parallel
Strand 6
B
213 216parallel
Strand 7
B
238 240parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
198 199anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 331first strand
Strand 2
B
299 302parallel
Strand 3
B
269 273parallel
Strand 4
B
346 351parallel
Strand 5
B
367 370parallel
Strand 6
B
392 393parallel
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