Analysis of interatomic Contacts of Structural Units in PDB entry:
9UFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UFZ entry

There are 4 chains in PDB entry 9UFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2ASP 661
B
 GLY 1LYS 277
C
 HIS 14LEU 204
D
 GLY 13HIS 109
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 9UFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 38Right-handed alpha
Helix 2
AA2
A
41 48Right-handed alpha
Helix 3
AA3
A
53 73Right-handed alpha
Helix 4
AA4
A
73 85Right-handed alpha
Helix 5
AA5
A
95 113Right-handed alpha
Helix 6
AA6
A
114 126Right-handed alpha
Helix 7
AA7
A
126 131Right-handed alpha
Helix 8
AA8
A
138 159Right-handed alpha
Helix 9
AA9
A
184 214Right-handed alpha
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
226 259Right-handed alpha
Helix 12
AB3
A
271 289Right-handed alpha
Helix 13
AB4
A
290 305Right-handed alpha
Helix 14
AB5
A
312 329Right-handed alpha
Helix 15
AB6
A
330 336Right-handed 310
Helix 16
AB7
A
342 355Right-handed alpha
Helix 17
AB8
A
355 369Right-handed alpha
Helix 18
AB9
A
370 372Right-handed 310
Helix 19
AC1
A
378 397Right-handed alpha
Helix 20
AC2
A
399 402Right-handed 310
Helix 21
AC3
A
403 411Right-handed alpha
Helix 22
AC4
A
413 426Right-handed alpha
Helix 23
AC5
A
427 444Right-handed alpha
Helix 24
AC6
A
449 461Right-handed alpha
Helix 25
AC7
A
468 476Right-handed alpha
Helix 26
AC8
A
488 490Right-handed 310
Helix 27
AC9
A
491 521Right-handed alpha
Helix 28
AD1
A
522 526Right-handed 310
Helix 29
AD2
A
562 571Right-handed alpha
Helix 30
AD3
A
593 608Right-handed alpha
Helix 31
AD4
A
610 630Right-handed alpha
Helix 32
AD5
A
639 657Right-handed alpha
Helix 33
AD6
B
4 8Right-handed 310
Helix 34
AD7
B
10 45Right-handed alpha
Helix 35
AD8
B
63 85Right-handed alpha
Helix 36
AD9
B
189 194Right-handed 310
Helix 37
AE1
B
203 211Right-handed alpha
Helix 38
AE2
B
212 215Right-handed 310
Helix 39
AE3
C
21 49Right-handed alpha
Helix 40
AE4
C
59 64Right-handed alpha
Helix 41
AE5
C
67 92Right-handed alpha
Helix 42
AE6
C
94 126Right-handed alpha
Helix 43
AE7
C
133 168Right-handed alpha
Helix 44
AE8
C
170 198Right-handed alpha
Helix 45
AE9
D
14 38Right-handed alpha
Helix 46
AF1
D
42 65Right-handed alpha
Helix 47
AF2
D
77 106Right-handed alpha
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There are 4 sheets in PDB entry 9UFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 586first strand
Strand 2
A
635 638anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
105 107anti-parallel
Strand 3
B
139 141parallel
Strand 4
B
167 169anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 130first strand
Strand 2
B
197 199parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 150first strand
Strand 2
B
159 161anti-parallel
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