Analysis of interatomic Contacts of Structural Units in PDB entry:
9UG2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UG2 entry

There are 22 chains in PDB entry 9UG2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	TRP 1	TRP 1
G	HIS 3	HIS 3
G	CYS 281	CYS 281
G	ALA 283	ALA 283
H	TRP 1	TRP 1
H	HIS 3	HIS 3
H	CYS 281	CYS 281
H	ALA 283	ALA 283
I	TRP 1	TRP 1
I	HIS 3	HIS 3
I	CYS 281	CYS 281
I	ALA 283	ALA 283
A	VAL 27	GLN 374
B	VAL 27	GLN 374
C	THR 5	GLU 72
C	GLY 74	GLU 364
D	THR 6	GLU 72
D	GLY 74	VAL 370
E	THR 6	GLU 72
E	GLY 74	CYS 374
F	THR 5	GLU 72
F	GLY 74	HIS 371

There are 99 helices in PDB entry 9UG2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	34	Right-handed alpha
Helix 2	AA2	A	55	59	Right-handed 310
Helix 3	AA3	A	94	112	Right-handed alpha
Helix 4	AA4	A	127	132	Right-handed alpha
Helix 5	AA5	A	179	183	Right-handed 310
Helix 6	AA6	A	206	224	Right-handed alpha
Helix 7	AA7	A	240	248	Right-handed alpha
Helix 8	AA8	A	260	268	Right-handed alpha
Helix 9	AA9	A	295	299	Right-handed 310
Helix 10	AB1	A	324	342	Right-handed alpha
Helix 11	AB2	A	359	364	Right-handed alpha
Helix 12	AB3	B	29	34	Right-handed alpha
Helix 13	AB4	B	55	59	Right-handed 310
Helix 14	AB5	B	94	112	Right-handed alpha
Helix 15	AB6	B	127	133	Right-handed alpha
Helix 16	AB7	B	179	183	Right-handed 310
Helix 17	AB8	B	206	224	Right-handed alpha
Helix 18	AB9	B	240	248	Right-handed alpha
Helix 19	AC1	B	260	267	Right-handed alpha
Helix 20	AC2	B	277	281	Right-handed 310
Helix 21	AC3	B	295	299	Right-handed 310
Helix 22	AC4	B	324	342	Right-handed alpha
Helix 23	AC5	B	359	364	Right-handed alpha
Helix 24	AC6	C	55	61	Right-handed alpha
Helix 25	AC7	C	78	92	Right-handed alpha
Helix 26	AC8	C	112	126	Right-handed alpha
Helix 27	AC9	C	141	145	Right-handed 310
Helix 28	AD1	C	181	193	Right-handed alpha
Helix 29	AD2	C	194	197	Right-handed 310
Helix 30	AD3	C	202	216	Right-handed alpha
Helix 31	AD4	C	222	233	Right-handed alpha
Helix 32	AD5	C	251	254	Right-handed 310
Helix 33	AD6	C	255	260	Right-handed alpha
Helix 34	AD7	C	261	262	Right-handed 310
Helix 35	AD8	C	263	268	Right-handed 310
Helix 36	AD9	C	276	284	Right-handed alpha
Helix 37	AE1	C	287	290	Right-handed 310
Helix 38	AE2	C	291	296	Right-handed alpha
Helix 39	AE3	C	308	319	Right-handed alpha
Helix 40	AE4	C	334	336	Right-handed 310
Helix 41	AE5	C	337	349	Right-handed alpha
Helix 42	AE6	C	358	363	Right-handed alpha
Helix 43	AE7	D	55	61	Right-handed alpha
Helix 44	AE8	D	78	92	Right-handed alpha
Helix 45	AE9	D	112	126	Right-handed alpha
Helix 46	AF1	D	137	146	Right-handed alpha
Helix 47	AF2	D	181	193	Right-handed alpha
Helix 48	AF3	D	202	216	Right-handed alpha
Helix 49	AF4	D	222	233	Right-handed alpha
Helix 50	AF5	D	252	257	Right-handed alpha
Helix 51	AF6	D	258	263	Right-handed alpha
Helix 52	AF7	D	264	268	Right-handed 310
Helix 53	AF8	D	275	284	Right-handed alpha
Helix 54	AF9	D	286	288	Right-handed 310
Helix 55	AG1	D	289	295	Right-handed alpha
Helix 56	AG2	D	302	306	Right-handed 310
Helix 57	AG3	D	308	320	Right-handed alpha
Helix 58	AG4	D	334	336	Right-handed 310
Helix 59	AG5	D	337	349	Right-handed alpha
Helix 60	AG6	D	350	353	Right-handed 310
Helix 61	AG7	D	359	366	Right-handed alpha
Helix 62	AG8	E	55	61	Right-handed alpha
Helix 63	AG9	E	78	92	Right-handed alpha
Helix 64	AH1	E	112	126	Right-handed alpha
Helix 65	AH2	E	137	146	Right-handed alpha
Helix 66	AH3	E	171	175	Right-handed 310
Helix 67	AH4	E	181	194	Right-handed alpha
Helix 68	AH5	E	195	197	Right-handed 310
Helix 69	AH6	E	202	217	Right-handed alpha
Helix 70	AH7	E	222	231	Right-handed alpha
Helix 71	AH8	E	252	257	Right-handed alpha
Helix 72	AH9	E	258	262	Right-handed 310
Helix 73	AI1	E	263	268	Right-handed 310
Helix 74	AI2	E	273	284	Right-handed alpha
Helix 75	AI3	E	289	296	Right-handed alpha
Helix 76	AI4	E	308	321	Right-handed alpha
Helix 77	AI5	E	337	349	Right-handed alpha
Helix 78	AI6	E	352	356	Right-handed 310
Helix 79	AI7	E	358	366	Right-handed alpha
Helix 80	AI8	E	367	372	Right-handed 310
Helix 81	AI9	F	55	61	Right-handed alpha
Helix 82	AJ1	F	78	92	Right-handed alpha
Helix 83	AJ2	F	112	126	Right-handed alpha
Helix 84	AJ3	F	136	146	Right-handed alpha
Helix 85	AJ4	F	171	175	Right-handed 310
Helix 86	AJ5	F	181	194	Right-handed alpha
Helix 87	AJ6	F	202	217	Right-handed alpha
Helix 88	AJ7	F	222	231	Right-handed alpha
Helix 89	AJ8	F	251	256	Right-handed 310
Helix 90	AJ9	F	257	262	Right-handed 310
Helix 91	AK1	F	263	268	Right-handed 310
Helix 92	AK2	F	273	284	Right-handed alpha
Helix 93	AK3	F	286	296	Right-handed alpha
Helix 94	AK4	F	303	306	Right-handed 310
Helix 95	AK5	F	308	321	Right-handed alpha
Helix 96	AK6	F	334	336	Right-handed 310
Helix 97	AK7	F	337	349	Right-handed alpha
Helix 98	AK8	F	350	355	Right-handed 310
Helix 99	AK9	F	359	366	Right-handed alpha

There are 29 sheets in PDB entry 9UG2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	42	46	anti-parallel
Strand 3	A	67	71	anti-parallel
Strand 4	A	86	89	anti-parallel
Strand 5	A	120	122	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	75	first strand
Strand 2	A	81	83	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	176	first strand
Strand 2	A	161	166	anti-parallel
Strand 3	A	188	192	anti-parallel
Strand 4	A	196	201	anti-parallel
Strand 5	A	230	232	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	289	first strand
Strand 2	A	272	277	anti-parallel
Strand 3	A	304	309	anti-parallel
Strand 4	A	314	319	anti-parallel
Strand 5	A	352	354	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	53	first strand
Strand 2	B	44	47	anti-parallel
Strand 3	B	67	74	anti-parallel
Strand 4	B	82	89	anti-parallel
Strand 5	B	117	122	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	165	first strand
Strand 2	B	188	192	anti-parallel
Strand 3	B	197	200	anti-parallel
Strand 4	B	231	232	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	274	first strand
Strand 2	B	305	308	anti-parallel
Strand 3	B	314	319	anti-parallel
Strand 4	B	349	354	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	17	21	anti-parallel
Strand 3	C	8	12	anti-parallel
Strand 4	C	103	107	parallel
Strand 5	C	132	136	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	35	38	anti-parallel
Strand 3	C	65	68	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	72	first strand
Strand 2	C	75	76	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	176	178	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	160	166	anti-parallel
Strand 3	C	150	155	anti-parallel
Strand 4	C	297	301	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	241	first strand
Strand 2	C	247	250	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	32	first strand
Strand 2	D	16	21	anti-parallel
Strand 3	D	8	11	anti-parallel
Strand 4	D	103	107	parallel
Strand 5	D	131	136	parallel
Strand 6	D	357	358	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	54	first strand
Strand 2	D	35	38	anti-parallel
Strand 3	D	65	66	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	72	first strand
Strand 2	D	75	76	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	160	166	anti-parallel
Strand 3	D	176	178	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	160	166	anti-parallel
Strand 3	D	150	154	anti-parallel
Strand 4	D	297	300	parallel
Strand 5	D	329	330	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	241	first strand
Strand 2	D	247	250	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	16	21	anti-parallel
Strand 3	E	8	11	anti-parallel
Strand 4	E	103	107	parallel
Strand 5	E	132	136	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	35	38	anti-parallel
Strand 3	E	65	68	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	72	first strand
Strand 2	E	75	76	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	178	first strand
Strand 2	E	160	162	anti-parallel
Strand 3	E	151	155	anti-parallel
Strand 4	E	297	300	parallel
Strand 5	E	329	330	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	238	241	first strand
Strand 2	E	247	250	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	32	first strand
Strand 2	F	16	21	anti-parallel
Strand 3	F	8	11	anti-parallel
Strand 4	F	103	106	parallel
Strand 5	F	131	135	parallel
Strand 6	F	357	358	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	35	38	anti-parallel
Strand 3	F	65	68	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	72	first strand
Strand 2	F	75	76	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	176	178	first strand
Strand 2	F	160	165	anti-parallel
Strand 3	F	150	155	anti-parallel
Strand 4	F	297	301	parallel
Strand 5	F	329	330	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	238	241	first strand
Strand 2	F	247	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UG2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UG2