Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UI4 entry

There are 10 chains in PDB entry 9UI4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	T 1	T 27
C	PRO 22	ASP 336
B	PRO 22	ASP 336
A	PRO 22	ASP 336
F	PRO 22	ASP 336
I	PRO 22	ASP 336
E	PRO 22	ASP 336
H	PRO 22	ASP 336
D	PRO 22	ASP 336
G	PRO 22	ASP 336

There are122 helices in PDB entry 9UI4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	26	31	Right-handed alpha
Helix 2	AA2	C	34	45	Right-handed alpha
Helix 3	AA3	C	48	55	Right-handed alpha
Helix 4	AA4	C	56	62	Right-handed alpha
Helix 5	AA5	C	70	80	Right-handed alpha
Helix 6	AA6	C	89	99	Right-handed alpha
Helix 7	AA7	C	106	114	Right-handed alpha
Helix 8	AA8	C	132	145	Right-handed alpha
Helix 9	AA9	C	167	179	Right-handed alpha
Helix 10	AB1	C	182	187	Right-handed alpha
Helix 11	AB2	C	196	213	Right-handed alpha
Helix 12	AB3	C	225	232	Right-handed alpha
Helix 13	AB4	C	237	260	Right-handed alpha
Helix 14	AB5	C	291	296	Right-handed alpha
Helix 15	AB6	B	26	31	Right-handed alpha
Helix 16	AB7	B	36	44	Right-handed alpha
Helix 17	AB8	B	48	52	Right-handed 310
Helix 18	AB9	B	58	63	Right-handed alpha
Helix 19	AC1	B	67	78	Right-handed alpha
Helix 20	AC2	B	88	96	Right-handed alpha
Helix 21	AC3	B	111	115	Right-handed 310
Helix 22	AC4	B	132	138	Right-handed alpha
Helix 23	AC5	B	141	146	Right-handed alpha
Helix 24	AC6	B	167	178	Right-handed alpha
Helix 25	AC7	B	183	187	Right-handed 310
Helix 26	AC8	B	196	212	Right-handed alpha
Helix 27	AC9	B	227	231	Right-handed 310
Helix 28	AD1	B	236	260	Right-handed alpha
Helix 29	AD2	A	24	28	Right-handed 310
Helix 30	AD3	A	38	43	Right-handed alpha
Helix 31	AD4	A	56	64	Right-handed alpha
Helix 32	AD5	A	70	75	Right-handed alpha
Helix 33	AD6	A	88	99	Right-handed alpha
Helix 34	AD7	A	105	110	Right-handed alpha
Helix 35	AD8	A	134	139	Right-handed alpha
Helix 36	AD9	A	167	175	Right-handed alpha
Helix 37	AE1	A	196	208	Right-handed alpha
Helix 38	AE2	A	209	211	Right-handed 310
Helix 39	AE3	A	223	227	Right-handed 310
Helix 40	AE4	A	237	259	Right-handed alpha
Helix 41	AE5	A	288	296	Right-handed alpha
Helix 42	AE6	F	34	44	Right-handed alpha
Helix 43	AE7	F	68	79	Right-handed alpha
Helix 44	AE8	F	93	98	Right-handed alpha
Helix 45	AE9	F	133	146	Right-handed alpha
Helix 46	AF1	F	147	151	Right-handed 310
Helix 47	AF2	F	170	178	Right-handed alpha
Helix 48	AF3	F	183	189	Right-handed alpha
Helix 49	AF4	F	197	206	Right-handed alpha
Helix 50	AF5	F	209	214	Right-handed alpha
Helix 51	AF6	F	224	232	Right-handed alpha
Helix 52	AF7	F	237	259	Right-handed alpha
Helix 53	AF8	F	288	296	Right-handed alpha
Helix 54	AF9	I	26	32	Right-handed 310
Helix 55	AG1	I	34	45	Right-handed alpha
Helix 56	AG2	I	48	54	Right-handed alpha
Helix 57	AG3	I	56	62	Right-handed alpha
Helix 58	AG4	I	67	82	Right-handed alpha
Helix 59	AG5	I	88	94	Right-handed alpha
Helix 60	AG6	I	95	98	Right-handed 310
Helix 61	AG7	I	106	113	Right-handed alpha
Helix 62	AG8	I	135	144	Right-handed alpha
Helix 63	AG9	I	167	178	Right-handed alpha
Helix 64	AH1	I	199	212	Right-handed alpha
Helix 65	AH2	I	237	259	Right-handed alpha
Helix 66	AH3	I	289	295	Right-handed alpha
Helix 67	AH4	E	34	38	Right-handed 310
Helix 68	AH5	E	41	45	Right-handed 310
Helix 69	AH6	E	48	54	Right-handed alpha
Helix 70	AH7	E	56	62	Right-handed alpha
Helix 71	AH8	E	67	80	Right-handed alpha
Helix 72	AH9	E	90	96	Right-handed alpha
Helix 73	AI1	E	106	113	Right-handed alpha
Helix 74	AI2	E	132	141	Right-handed alpha
Helix 75	AI3	E	168	179	Right-handed alpha
Helix 76	AI4	E	181	187	Right-handed alpha
Helix 77	AI5	E	196	207	Right-handed alpha
Helix 78	AI6	E	207	212	Right-handed alpha
Helix 79	AI7	E	227	232	Right-handed alpha
Helix 80	AI8	E	237	259	Right-handed alpha
Helix 81	AI9	E	288	294	Right-handed alpha
Helix 82	AJ1	H	34	43	Right-handed alpha
Helix 83	AJ2	H	48	54	Right-handed alpha
Helix 84	AJ3	H	58	62	Right-handed 310
Helix 85	AJ4	H	67	82	Right-handed alpha
Helix 86	AJ5	H	88	93	Right-handed alpha
Helix 87	AJ6	H	94	99	Right-handed alpha
Helix 88	AJ7	H	106	113	Right-handed alpha
Helix 89	AJ8	H	132	144	Right-handed alpha
Helix 90	AJ9	H	169	178	Right-handed alpha
Helix 91	AK1	H	181	189	Right-handed alpha
Helix 92	AK2	H	196	211	Right-handed alpha
Helix 93	AK3	H	223	232	Right-handed alpha
Helix 94	AK4	H	234	256	Right-handed alpha
Helix 95	AK5	H	288	296	Right-handed alpha
Helix 96	AK6	D	34	45	Right-handed alpha
Helix 97	AK7	D	48	55	Right-handed alpha
Helix 98	AK8	D	58	63	Right-handed alpha
Helix 99	AK9	D	67	82	Right-handed alpha
Helix 100	AL1	D	89	98	Right-handed alpha
Helix 101	AL2	D	108	113	Right-handed alpha
Helix 102	AL3	D	132	144	Right-handed alpha
Helix 103	AL4	D	167	179	Right-handed alpha
Helix 104	AL5	D	181	188	Right-handed alpha
Helix 105	AL6	D	196	211	Right-handed alpha
Helix 106	AL7	D	227	232	Right-handed alpha
Helix 107	AL8	D	237	260	Right-handed alpha
Helix 108	AL9	D	289	296	Right-handed alpha
Helix 109	AM1	G	24	30	Right-handed 310
Helix 110	AM2	G	36	41	Right-handed alpha
Helix 111	AM3	G	49	54	Right-handed alpha
Helix 112	AM4	G	56	62	Right-handed alpha
Helix 113	AM5	G	67	82	Right-handed alpha
Helix 114	AM6	G	88	97	Right-handed alpha
Helix 115	AM7	G	107	113	Right-handed alpha
Helix 116	AM8	G	132	144	Right-handed alpha
Helix 117	AM9	G	167	176	Right-handed alpha
Helix 118	AN1	G	196	208	Right-handed alpha
Helix 119	AN2	G	209	214	Right-handed alpha
Helix 120	AN3	G	225	232	Right-handed alpha
Helix 121	AN4	G	237	260	Right-handed alpha
Helix 122	AN5	G	288	296	Right-handed alpha

There are 27 sheets in PDB entry 9UI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	D	189	192	anti-parallel
Strand 3	D	156	161	parallel
Strand 4	D	216	225	parallel
Strand 5	D	263	267	parallel
Strand 6	D	123	127	parallel
Strand 7	D	298	304	parallel
Strand 8	D	309	315	anti-parallel
Strand 9	D	327	330	anti-parallel
Strand 10	D	333	335	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	160	first strand
Strand 2	C	216	221	parallel
Strand 3	C	262	264	parallel
Strand 4	C	122	127	parallel
Strand 5	C	298	304	parallel
Strand 6	C	309	316	anti-parallel
Strand 7	C	324	328	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	271	first strand
Strand 2	C	284	286	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	218	222	parallel
Strand 3	B	262	266	parallel
Strand 4	B	122	126	parallel
Strand 5	B	300	301	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	310	first strand
Strand 2	B	327	328	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	267	first strand
Strand 2	A	125	126	parallel
Strand 3	A	299	302	parallel
Strand 4	A	312	315	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	157	first strand
Strand 2	A	216	219	parallel
Strand 3	A	262	263	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	271	first strand
Strand 2	A	284	286	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	330	first strand
Strand 2	A	333	335	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	101	102	first strand
Strand 2	F	117	118	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	124	127	first strand
Strand 2	F	299	302	parallel
Strand 3	F	312	313	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	269	271	first strand
Strand 2	F	284	286	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	125	126	first strand
Strand 2	I	300	304	parallel
Strand 3	I	310	313	anti-parallel
Strand 4	I	324	327	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	157	159	first strand
Strand 2	I	189	191	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	220	221	first strand
Strand 2	I	264	265	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	102	first strand
Strand 2	E	117	118	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	263	264	first strand
Strand 2	E	122	127	parallel
Strand 3	E	298	304	parallel
Strand 4	E	310	311	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	269	271	first strand
Strand 2	E	284	286	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	328	329	first strand
Strand 2	E	334	335	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	265	267	first strand
Strand 2	H	124	127	parallel
Strand 3	H	299	304	parallel
Strand 4	H	309	314	anti-parallel
Strand 5	H	325	329	anti-parallel
Strand 6	H	334	335	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	157	first strand
Strand 2	H	216	218	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	160	161	first strand
Strand 2	H	221	222	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	269	270	first strand
Strand 2	H	285	286	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	271	first strand
Strand 2	D	284	286	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	102	first strand
Strand 2	G	117	118	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	189	193	first strand
Strand 2	G	156	161	parallel
Strand 3	G	216	220	parallel
Strand 4	G	262	267	parallel
Strand 5	G	122	127	parallel
Strand 6	G	298	304	parallel
Strand 7	G	309	315	anti-parallel
Strand 8	G	324	330	anti-parallel
Strand 9	G	333	335	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	269	270	first strand
Strand 2	G	285	286	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UI4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI4