Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UI7 entry

There are 10 chains in PDB entry 9UI7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	PRO 22	ASP 336
E	PRO 22	ASP 336
F	PRO 22	ASP 336
G	PRO 22	ASP 336
H	T 11	A 39
I	T 9	A 38
L	T 1	T 22
A	PRO 22	ASP 336
C	PRO 22	ASP 336
B	PRO 22	ASP 336

There are 93 helices in PDB entry 9UI7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	24	28	Right-handed 310
Helix 2	AA2	D	34	45	Right-handed alpha
Helix 3	AA3	D	48	54	Right-handed alpha
Helix 4	AA4	D	57	62	Right-handed alpha
Helix 5	AA5	D	67	80	Right-handed alpha
Helix 6	AA6	D	89	97	Right-handed alpha
Helix 7	AA7	D	106	113	Right-handed alpha
Helix 8	AA8	D	132	144	Right-handed alpha
Helix 9	AA9	D	167	178	Right-handed alpha
Helix 10	AB1	D	182	188	Right-handed alpha
Helix 11	AB2	D	196	213	Right-handed alpha
Helix 12	AB3	D	225	232	Right-handed alpha
Helix 13	AB4	D	237	260	Right-handed alpha
Helix 14	AB5	D	288	296	Right-handed alpha
Helix 15	AB6	E	37	44	Right-handed alpha
Helix 16	AB7	E	48	54	Right-handed alpha
Helix 17	AB8	E	56	62	Right-handed alpha
Helix 18	AB9	E	67	82	Right-handed alpha
Helix 19	AC1	E	89	97	Right-handed alpha
Helix 20	AC2	E	106	113	Right-handed alpha
Helix 21	AC3	E	132	144	Right-handed alpha
Helix 22	AC4	E	145	146	Right-handed 310
Helix 23	AC5	E	147	151	Right-handed 310
Helix 24	AC6	E	167	178	Right-handed alpha
Helix 25	AC7	E	181	186	Right-handed alpha
Helix 26	AC8	E	196	214	Right-handed alpha
Helix 27	AC9	E	238	260	Right-handed alpha
Helix 28	AD1	E	290	295	Right-handed alpha
Helix 29	AD2	F	24	28	Right-handed 310
Helix 30	AD3	F	35	44	Right-handed alpha
Helix 31	AD4	F	48	54	Right-handed alpha
Helix 32	AD5	F	57	62	Right-handed alpha
Helix 33	AD6	F	67	79	Right-handed alpha
Helix 34	AD7	F	88	96	Right-handed alpha
Helix 35	AD8	F	106	113	Right-handed alpha
Helix 36	AD9	F	134	141	Right-handed alpha
Helix 37	AE1	F	167	178	Right-handed alpha
Helix 38	AE2	F	182	188	Right-handed alpha
Helix 39	AE3	F	196	214	Right-handed alpha
Helix 40	AE4	F	225	231	Right-handed alpha
Helix 41	AE5	F	242	259	Right-handed alpha
Helix 42	AE6	F	288	296	Right-handed alpha
Helix 43	AE7	G	49	54	Right-handed alpha
Helix 44	AE8	G	67	82	Right-handed alpha
Helix 45	AE9	G	88	98	Right-handed alpha
Helix 46	AF1	G	106	113	Right-handed alpha
Helix 47	AF2	G	132	144	Right-handed alpha
Helix 48	AF3	G	167	178	Right-handed alpha
Helix 49	AF4	G	182	187	Right-handed alpha
Helix 50	AF5	G	198	214	Right-handed alpha
Helix 51	AF6	G	223	230	Right-handed alpha
Helix 52	AF7	G	239	257	Right-handed alpha
Helix 53	AF8	G	289	294	Right-handed alpha
Helix 54	AF9	A	24	29	Right-handed 310
Helix 55	AG1	A	34	44	Right-handed alpha
Helix 56	AG2	A	48	54	Right-handed alpha
Helix 57	AG3	A	56	61	Right-handed alpha
Helix 58	AG4	A	67	82	Right-handed alpha
Helix 59	AG5	A	88	98	Right-handed alpha
Helix 60	AG6	A	106	111	Right-handed alpha
Helix 61	AG7	A	132	144	Right-handed alpha
Helix 62	AG8	A	170	178	Right-handed alpha
Helix 63	AG9	A	182	188	Right-handed alpha
Helix 64	AH1	A	196	214	Right-handed alpha
Helix 65	AH2	A	225	232	Right-handed alpha
Helix 66	AH3	A	237	260	Right-handed alpha
Helix 67	AH4	A	290	296	Right-handed alpha
Helix 68	AH5	C	24	29	Right-handed 310
Helix 69	AH6	C	34	44	Right-handed alpha
Helix 70	AH7	C	48	54	Right-handed alpha
Helix 71	AH8	C	56	62	Right-handed alpha
Helix 72	AH9	C	67	82	Right-handed alpha
Helix 73	AI1	C	88	98	Right-handed alpha
Helix 74	AI2	C	106	113	Right-handed alpha
Helix 75	AI3	C	132	144	Right-handed alpha
Helix 76	AI4	C	167	176	Right-handed alpha
Helix 77	AI5	C	181	189	Right-handed alpha
Helix 78	AI6	C	197	214	Right-handed alpha
Helix 79	AI7	C	237	259	Right-handed alpha
Helix 80	AI8	C	290	296	Right-handed alpha
Helix 81	AI9	B	37	43	Right-handed alpha
Helix 82	AJ1	B	48	54	Right-handed alpha
Helix 83	AJ2	B	56	62	Right-handed alpha
Helix 84	AJ3	B	67	82	Right-handed alpha
Helix 85	AJ4	B	89	97	Right-handed alpha
Helix 86	AJ5	B	106	113	Right-handed alpha
Helix 87	AJ6	B	132	144	Right-handed alpha
Helix 88	AJ7	B	167	178	Right-handed alpha
Helix 89	AJ8	B	182	188	Right-handed alpha
Helix 90	AJ9	B	196	210	Right-handed alpha
Helix 91	AK1	B	223	232	Right-handed alpha
Helix 92	AK2	B	237	260	Right-handed alpha
Helix 93	AK3	B	288	296	Right-handed alpha

There are 10 sheets in PDB entry 9UI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	88	first strand
Strand 2	E	190	193	anti-parallel
Strand 3	E	156	161	parallel
Strand 4	E	216	221	parallel
Strand 5	E	262	265	parallel
Strand 6	E	122	124	parallel
Strand 7	E	298	304	parallel
Strand 8	E	309	314	anti-parallel
Strand 9	E	326	329	anti-parallel
Strand 10	E	334	335	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	126	first strand
Strand 2	D	299	303	parallel
Strand 3	D	309	312	anti-parallel
Strand 4	D	325	330	anti-parallel
Strand 5	D	333	335	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	157	first strand
Strand 2	D	216	220	parallel
Strand 3	D	262	264	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	192	193	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	F	190	192	anti-parallel
Strand 3	F	156	160	parallel
Strand 4	F	216	221	parallel
Strand 5	F	262	265	parallel
Strand 6	F	123	127	parallel
Strand 7	F	298	304	parallel
Strand 8	F	310	315	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	329	330	first strand
Strand 2	F	333	334	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	156	159	first strand
Strand 2	G	216	221	parallel
Strand 3	G	262	266	parallel
Strand 4	G	123	125	parallel
Strand 5	G	298	304	parallel
Strand 6	G	309	315	anti-parallel
Strand 7	G	324	329	anti-parallel
Strand 8	G	334	335	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	191	first strand
Strand 2	A	156	159	parallel
Strand 3	A	216	221	parallel
Strand 4	A	262	268	parallel
Strand 5	A	122	127	parallel
Strand 6	A	298	304	parallel
Strand 7	A	309	315	anti-parallel
Strand 8	A	324	328	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	324	328	first strand
Strand 2	C	309	315	anti-parallel
Strand 3	C	298	304	anti-parallel
Strand 4	C	122	127	parallel
Strand 5	C	262	266	parallel
Strand 6	C	216	221	parallel
Strand 7	C	156	161	parallel
Strand 8	C	190	193	parallel
Strand 9	B	87	88	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	193	first strand
Strand 2	B	156	161	parallel
Strand 3	B	216	221	parallel
Strand 4	B	262	267	parallel
Strand 5	B	122	127	parallel
Strand 6	B	298	304	parallel
Strand 7	B	309	315	anti-parallel
Strand 8	B	324	329	anti-parallel
Strand 9	B	334	335	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UI7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI7