Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UI8 entry

There are 12 chains in PDB entry 9UI8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	PRO 22	ASP 336
G	PRO 22	ASP 336
L	T 3	T 27
T	G 23	C 41
U	G 8	T 27
C	PRO 22	ASP 336
B	PRO 22	ASP 336
A	PRO 22	ASP 336
F	PRO 22	ASP 336
I	PRO 22	ASP 336
H	PRO 22	ASP 336
D	PRO 22	ASP 336

There are124 helices in PDB entry 9UI8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	24	29	Right-handed 310
Helix 2	AA2	E	34	43	Right-handed alpha
Helix 3	AA3	E	56	61	Right-handed alpha
Helix 4	AA4	E	67	79	Right-handed alpha
Helix 5	AA5	E	106	113	Right-handed alpha
Helix 6	AA6	E	139	144	Right-handed alpha
Helix 7	AA7	E	173	179	Right-handed alpha
Helix 8	AA8	E	199	214	Right-handed alpha
Helix 9	AA9	E	223	226	Right-handed 310
Helix 10	AB1	E	227	232	Right-handed alpha
Helix 11	AB2	E	237	246	Right-handed alpha
Helix 12	AB3	E	247	260	Right-handed alpha
Helix 13	AB4	G	35	45	Right-handed alpha
Helix 14	AB5	G	48	54	Right-handed alpha
Helix 15	AB6	G	56	60	Right-handed 310
Helix 16	AB7	G	67	82	Right-handed alpha
Helix 17	AB8	G	90	98	Right-handed alpha
Helix 18	AB9	G	109	114	Right-handed alpha
Helix 19	AC1	G	135	144	Right-handed alpha
Helix 20	AC2	G	170	178	Right-handed alpha
Helix 21	AC3	G	184	189	Right-handed alpha
Helix 22	AC4	G	196	208	Right-handed alpha
Helix 23	AC5	G	227	232	Right-handed alpha
Helix 24	AC6	G	237	260	Right-handed alpha
Helix 25	AC7	C	25	30	Right-handed alpha
Helix 26	AC8	C	36	44	Right-handed alpha
Helix 27	AC9	C	48	54	Right-handed alpha
Helix 28	AD1	C	56	62	Right-handed alpha
Helix 29	AD2	C	67	82	Right-handed alpha
Helix 30	AD3	C	89	93	Right-handed alpha
Helix 31	AD4	C	95	99	Right-handed 310
Helix 32	AD5	C	132	141	Right-handed alpha
Helix 33	AD6	C	147	151	Right-handed 310
Helix 34	AD7	C	167	178	Right-handed alpha
Helix 35	AD8	C	181	188	Right-handed alpha
Helix 36	AD9	C	198	212	Right-handed alpha
Helix 37	AE1	C	225	232	Right-handed alpha
Helix 38	AE2	C	237	253	Right-handed alpha
Helix 39	AE3	C	253	258	Right-handed alpha
Helix 40	AE4	C	288	290	Right-handed 310
Helix 41	AE5	C	291	296	Right-handed alpha
Helix 42	AE6	B	26	30	Right-handed 310
Helix 43	AE7	B	34	44	Right-handed alpha
Helix 44	AE8	B	48	54	Right-handed alpha
Helix 45	AE9	B	56	62	Right-handed alpha
Helix 46	AF1	B	67	78	Right-handed alpha
Helix 47	AF2	B	79	82	Right-handed 310
Helix 48	AF3	B	89	98	Right-handed alpha
Helix 49	AF4	B	106	113	Right-handed alpha
Helix 50	AF5	B	132	146	Right-handed alpha
Helix 51	AF6	B	167	179	Right-handed alpha
Helix 52	AF7	B	181	187	Right-handed alpha
Helix 53	AF8	B	203	211	Right-handed alpha
Helix 54	AF9	B	225	231	Right-handed alpha
Helix 55	AG1	B	236	259	Right-handed alpha
Helix 56	AG2	B	289	296	Right-handed alpha
Helix 57	AG3	A	24	28	Right-handed 310
Helix 58	AG4	A	34	45	Right-handed alpha
Helix 59	AG5	A	49	53	Right-handed 310
Helix 60	AG6	A	56	63	Right-handed alpha
Helix 61	AG7	A	70	82	Right-handed alpha
Helix 62	AG8	A	88	98	Right-handed alpha
Helix 63	AG9	A	106	113	Right-handed alpha
Helix 64	AH1	A	132	144	Right-handed alpha
Helix 65	AH2	A	167	179	Right-handed alpha
Helix 66	AH3	A	181	189	Right-handed alpha
Helix 67	AH4	A	196	211	Right-handed alpha
Helix 68	AH5	A	227	232	Right-handed alpha
Helix 69	AH6	A	238	243	Right-handed alpha
Helix 70	AH7	A	244	260	Right-handed alpha
Helix 71	AH8	A	289	294	Right-handed alpha
Helix 72	AH9	F	35	45	Right-handed alpha
Helix 73	AI1	F	48	53	Right-handed alpha
Helix 74	AI2	F	56	62	Right-handed alpha
Helix 75	AI3	F	67	79	Right-handed alpha
Helix 76	AI4	F	89	93	Right-handed alpha
Helix 77	AI5	F	107	113	Right-handed alpha
Helix 78	AI6	F	135	144	Right-handed alpha
Helix 79	AI7	F	170	175	Right-handed alpha
Helix 80	AI8	F	182	188	Right-handed alpha
Helix 81	AI9	F	196	202	Right-handed alpha
Helix 82	AJ1	F	203	211	Right-handed alpha
Helix 83	AJ2	F	225	230	Right-handed alpha
Helix 84	AJ3	F	241	252	Right-handed alpha
Helix 85	AJ4	F	252	259	Right-handed alpha
Helix 86	AJ5	I	25	30	Right-handed alpha
Helix 87	AJ6	I	34	44	Right-handed alpha
Helix 88	AJ7	I	48	55	Right-handed 310
Helix 89	AJ8	I	59	63	Right-handed 310
Helix 90	AJ9	I	67	82	Right-handed alpha
Helix 91	AK1	I	88	97	Right-handed alpha
Helix 92	AK2	I	106	113	Right-handed alpha
Helix 93	AK3	I	135	144	Right-handed alpha
Helix 94	AK4	I	145	146	Right-handed 310
Helix 95	AK5	I	147	151	Right-handed 310
Helix 96	AK6	I	167	178	Right-handed alpha
Helix 97	AK7	I	182	187	Right-handed alpha
Helix 98	AK8	I	196	212	Right-handed alpha
Helix 99	AK9	I	225	232	Right-handed alpha
Helix 100	AL1	I	237	259	Right-handed alpha
Helix 101	AL2	I	288	293	Right-handed alpha
Helix 102	AL3	H	24	28	Right-handed 310
Helix 103	AL4	H	34	42	Right-handed alpha
Helix 104	AL5	H	48	55	Right-handed alpha
Helix 105	AL6	H	56	62	Right-handed alpha
Helix 106	AL7	H	67	82	Right-handed alpha
Helix 107	AL8	H	88	96	Right-handed alpha
Helix 108	AL9	H	97	99	Right-handed 310
Helix 109	AM1	H	106	112	Right-handed alpha
Helix 110	AM2	H	139	144	Right-handed alpha
Helix 111	AM3	H	181	188	Right-handed alpha
Helix 112	AM4	H	203	212	Right-handed alpha
Helix 113	AM5	H	226	232	Right-handed alpha
Helix 114	AM6	H	237	258	Right-handed alpha
Helix 115	AM7	D	24	29	Right-handed 310
Helix 116	AM8	D	34	43	Right-handed alpha
Helix 117	AM9	D	48	54	Right-handed alpha
Helix 118	AN1	D	56	63	Right-handed alpha
Helix 119	AN2	D	68	82	Right-handed alpha
Helix 120	AN3	D	92	97	Right-handed alpha
Helix 121	AN4	D	107	113	Right-handed alpha
Helix 122	AN5	D	184	187	Right-handed 310
Helix 123	AN6	D	203	211	Right-handed alpha
Helix 124	AN7	D	247	259	Right-handed alpha

There are 26 sheets in PDB entry 9UI8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	F	189	193	anti-parallel
Strand 3	F	157	161	parallel
Strand 4	F	220	222	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	102	first strand
Strand 2	E	117	118	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	263	266	first strand
Strand 2	E	122	126	parallel
Strand 3	E	298	304	parallel
Strand 4	E	310	316	anti-parallel
Strand 5	E	324	327	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	221	first strand
Strand 2	E	156	161	parallel
Strand 3	E	190	193	parallel
Strand 4	D	87	88	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	269	271	first strand
Strand 2	E	284	286	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	87	88	first strand
Strand 2	H	190	193	anti-parallel
Strand 3	H	156	161	parallel
Strand 4	H	216	219	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	220	221	first strand
Strand 2	G	264	266	parallel
Strand 3	G	123	126	parallel
Strand 4	G	298	304	parallel
Strand 5	G	309	316	anti-parallel
Strand 6	G	324	330	anti-parallel
Strand 7	G	333	335	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	158	159	first strand
Strand 2	G	190	191	parallel
Strand 3	F	87	88	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	269	271	first strand
Strand 2	G	284	286	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	D	189	193	anti-parallel
Strand 3	D	156	161	parallel
Strand 4	D	216	219	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	218	219	first strand
Strand 2	C	157	161	parallel
Strand 3	C	189	193	parallel
Strand 4	B	87	88	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	304	first strand
Strand 2	C	309	313	anti-parallel
Strand 3	C	326	330	anti-parallel
Strand 4	C	333	335	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	124	first strand
Strand 2	B	263	265	parallel
Strand 3	B	219	221	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	270	first strand
Strand 2	B	285	286	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	302	first strand
Strand 2	B	312	316	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	126	first strand
Strand 2	A	298	304	parallel
Strand 3	A	310	314	anti-parallel
Strand 4	A	326	330	anti-parallel
Strand 5	A	333	335	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	160	first strand
Strand 2	A	216	221	parallel
Strand 3	A	263	265	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	101	102	first strand
Strand 2	F	117	118	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	263	266	first strand
Strand 2	F	122	126	parallel
Strand 3	F	298	304	parallel
Strand 4	F	309	316	anti-parallel
Strand 5	F	327	330	anti-parallel
Strand 6	F	333	335	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	157	159	first strand
Strand 2	I	218	220	parallel
Strand 3	I	262	263	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	269	270	first strand
Strand 2	I	285	286	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	302	304	first strand
Strand 2	I	310	313	anti-parallel
Strand 3	I	324	327	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	125	127	first strand
Strand 2	H	300	306	parallel
Strand 3	H	309	313	anti-parallel
Strand 4	H	324	325	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	328	330	first strand
Strand 2	H	333	335	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	126	first strand
Strand 2	D	298	304	parallel
Strand 3	D	309	313	anti-parallel
Strand 4	D	324	330	anti-parallel
Strand 5	D	333	335	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	271	first strand
Strand 2	D	284	286	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UI8

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI8