Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UI9 entry

There are 12 chains in PDB entry 9UI9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	PRO 22	ASP 336
F	PRO 22	ASP 336
G	PRO 22	ASP 336
U	G 8	T 37
T	A 12	C 41
H	PRO 22	ASP 336
I	PRO 22	ASP 336
L	T 9	T 35
A	PRO 22	ASP 336
B	PRO 22	ASP 336
C	PRO 22	ASP 336
D	PRO 22	ASP 336

There are129 helices in PDB entry 9UI9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	25	31	Right-handed alpha
Helix 2	AA2	E	34	44	Right-handed alpha
Helix 3	AA3	E	48	54	Right-handed alpha
Helix 4	AA4	E	56	61	Right-handed alpha
Helix 5	AA5	E	67	82	Right-handed alpha
Helix 6	AA6	E	89	94	Right-handed alpha
Helix 7	AA7	E	106	113	Right-handed alpha
Helix 8	AA8	E	132	144	Right-handed alpha
Helix 9	AA9	E	145	146	Right-handed 310
Helix 10	AB1	E	147	151	Right-handed 310
Helix 11	AB2	E	167	178	Right-handed alpha
Helix 12	AB3	E	182	187	Right-handed alpha
Helix 13	AB4	E	196	214	Right-handed alpha
Helix 14	AB5	E	237	245	Right-handed alpha
Helix 15	AB6	E	245	260	Right-handed alpha
Helix 16	AB7	E	289	294	Right-handed alpha
Helix 17	AB8	F	35	45	Right-handed alpha
Helix 18	AB9	F	48	54	Right-handed alpha
Helix 19	AC1	F	56	63	Right-handed alpha
Helix 20	AC2	F	67	82	Right-handed alpha
Helix 21	AC3	F	89	94	Right-handed alpha
Helix 22	AC4	F	106	113	Right-handed alpha
Helix 23	AC5	F	137	144	Right-handed alpha
Helix 24	AC6	F	174	179	Right-handed alpha
Helix 25	AC7	F	181	187	Right-handed alpha
Helix 26	AC8	F	198	212	Right-handed alpha
Helix 27	AC9	F	227	232	Right-handed alpha
Helix 28	AD1	F	237	260	Right-handed alpha
Helix 29	AD2	F	289	294	Right-handed alpha
Helix 30	AD3	G	34	42	Right-handed alpha
Helix 31	AD4	G	48	54	Right-handed alpha
Helix 32	AD5	G	56	61	Right-handed alpha
Helix 33	AD6	G	68	80	Right-handed alpha
Helix 34	AD7	G	89	95	Right-handed alpha
Helix 35	AD8	G	106	114	Right-handed alpha
Helix 36	AD9	G	132	144	Right-handed alpha
Helix 37	AE1	G	167	178	Right-handed alpha
Helix 38	AE2	G	182	188	Right-handed alpha
Helix 39	AE3	G	196	214	Right-handed alpha
Helix 40	AE4	G	223	227	Right-handed 310
Helix 41	AE5	G	240	260	Right-handed alpha
Helix 42	AE6	G	289	295	Right-handed alpha
Helix 43	AE7	H	24	28	Right-handed 310
Helix 44	AE8	H	36	43	Right-handed alpha
Helix 45	AE9	H	48	54	Right-handed alpha
Helix 46	AF1	H	56	63	Right-handed alpha
Helix 47	AF2	H	72	77	Right-handed alpha
Helix 48	AF3	H	88	96	Right-handed alpha
Helix 49	AF4	H	107	113	Right-handed alpha
Helix 50	AF5	H	135	145	Right-handed alpha
Helix 51	AF6	H	167	178	Right-handed alpha
Helix 52	AF7	H	181	189	Right-handed alpha
Helix 53	AF8	H	196	213	Right-handed alpha
Helix 54	AF9	H	226	232	Right-handed alpha
Helix 55	AG1	H	237	260	Right-handed alpha
Helix 56	AG2	H	272	277	Right-handed 310
Helix 57	AG3	H	289	294	Right-handed alpha
Helix 58	AG4	I	34	44	Right-handed alpha
Helix 59	AG5	I	48	54	Right-handed alpha
Helix 60	AG6	I	56	63	Right-handed alpha
Helix 61	AG7	I	67	82	Right-handed alpha
Helix 62	AG8	I	90	98	Right-handed alpha
Helix 63	AG9	I	107	112	Right-handed alpha
Helix 64	AH1	I	132	143	Right-handed alpha
Helix 65	AH2	I	147	151	Right-handed 310
Helix 66	AH3	I	167	179	Right-handed alpha
Helix 67	AH4	I	183	188	Right-handed alpha
Helix 68	AH5	I	197	208	Right-handed alpha
Helix 69	AH6	I	223	232	Right-handed alpha
Helix 70	AH7	I	236	259	Right-handed alpha
Helix 71	AH8	I	291	296	Right-handed alpha
Helix 72	AH9	A	24	28	Right-handed 310
Helix 73	AI1	A	34	44	Right-handed alpha
Helix 74	AI2	A	48	55	Right-handed alpha
Helix 75	AI3	A	56	63	Right-handed alpha
Helix 76	AI4	A	67	82	Right-handed alpha
Helix 77	AI5	A	89	98	Right-handed alpha
Helix 78	AI6	A	106	113	Right-handed alpha
Helix 79	AI7	A	132	144	Right-handed alpha
Helix 80	AI8	A	167	179	Right-handed alpha
Helix 81	AI9	A	181	189	Right-handed alpha
Helix 82	AJ1	A	196	212	Right-handed alpha
Helix 83	AJ2	A	225	231	Right-handed alpha
Helix 84	AJ3	A	233	236	Right-handed 310
Helix 85	AJ4	A	237	260	Right-handed alpha
Helix 86	AJ5	B	24	28	Right-handed 310
Helix 87	AJ6	B	34	44	Right-handed alpha
Helix 88	AJ7	B	48	55	Right-handed alpha
Helix 89	AJ8	B	56	62	Right-handed alpha
Helix 90	AJ9	B	68	82	Right-handed alpha
Helix 91	AK1	B	89	98	Right-handed alpha
Helix 92	AK2	B	107	113	Right-handed alpha
Helix 93	AK3	B	132	144	Right-handed alpha
Helix 94	AK4	B	167	178	Right-handed alpha
Helix 95	AK5	B	181	189	Right-handed alpha
Helix 96	AK6	B	200	205	Right-handed alpha
Helix 97	AK7	B	205	212	Right-handed alpha
Helix 98	AK8	B	226	230	Right-handed 310
Helix 99	AK9	B	234	236	Right-handed 310
Helix 100	AL1	B	237	260	Right-handed alpha
Helix 101	AL2	B	291	296	Right-handed alpha
Helix 102	AL3	C	25	30	Right-handed alpha
Helix 103	AL4	C	36	44	Right-handed alpha
Helix 104	AL5	C	56	63	Right-handed alpha
Helix 105	AL6	C	67	82	Right-handed alpha
Helix 106	AL7	C	89	97	Right-handed alpha
Helix 107	AL8	C	108	113	Right-handed alpha
Helix 108	AL9	C	135	144	Right-handed alpha
Helix 109	AM1	C	167	179	Right-handed alpha
Helix 110	AM2	C	181	186	Right-handed alpha
Helix 111	AM3	C	198	214	Right-handed alpha
Helix 112	AM4	C	227	232	Right-handed alpha
Helix 113	AM5	C	237	255	Right-handed alpha
Helix 114	AM6	C	291	296	Right-handed alpha
Helix 115	AM7	D	34	43	Right-handed alpha
Helix 116	AM8	D	48	54	Right-handed alpha
Helix 117	AM9	D	56	62	Right-handed alpha
Helix 118	AN1	D	67	82	Right-handed alpha
Helix 119	AN2	D	90	95	Right-handed alpha
Helix 120	AN3	D	108	113	Right-handed alpha
Helix 121	AN4	D	134	139	Right-handed alpha
Helix 122	AN5	D	139	144	Right-handed alpha
Helix 123	AN6	D	173	179	Right-handed alpha
Helix 124	AN7	D	182	187	Right-handed alpha
Helix 125	AN8	D	196	202	Right-handed alpha
Helix 126	AN9	D	202	212	Right-handed alpha
Helix 127	AO1	D	227	232	Right-handed alpha
Helix 128	AO2	D	237	259	Right-handed alpha
Helix 129	AO3	D	288	293	Right-handed alpha

There are 27 sheets in PDB entry 9UI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	F	189	193	anti-parallel
Strand 3	F	157	161	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	102	first strand
Strand 2	E	117	118	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	324	328	first strand
Strand 2	E	309	316	anti-parallel
Strand 3	E	299	304	anti-parallel
Strand 4	E	122	127	parallel
Strand 5	E	262	267	parallel
Strand 6	E	218	221	parallel
Strand 7	E	157	161	parallel
Strand 8	E	189	193	parallel
Strand 9	D	87	88	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	269	271	first strand
Strand 2	E	284	286	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	88	first strand
Strand 2	G	189	191	anti-parallel
Strand 3	G	157	159	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	101	102	first strand
Strand 2	F	117	118	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	125	127	first strand
Strand 2	F	299	303	parallel
Strand 3	F	311	316	anti-parallel
Strand 4	F	324	326	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	221	222	first strand
Strand 2	F	265	266	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	87	88	first strand
Strand 2	H	190	193	anti-parallel
Strand 3	H	160	161	parallel
Strand 4	H	221	224	parallel
Strand 5	H	263	267	parallel
Strand 6	H	122	125	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	269	271	first strand
Strand 2	G	284	286	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	301	306	first strand
Strand 2	G	309	313	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	328	329	first strand
Strand 2	G	334	335	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	101	102	first strand
Strand 2	H	117	118	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	299	302	first strand
Strand 2	H	310	316	anti-parallel
Strand 3	H	325	330	anti-parallel
Strand 4	H	333	335	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	190	191	first strand
Strand 2	I	158	161	parallel
Strand 3	I	221	222	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	303	304	first strand
Strand 2	I	310	311	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	328	330	first strand
Strand 2	I	333	335	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	B	190	191	anti-parallel
Strand 3	B	158	159	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	262	267	parallel
Strand 3	A	122	126	parallel
Strand 4	A	298	304	parallel
Strand 5	A	309	314	anti-parallel
Strand 6	A	327	330	anti-parallel
Strand 7	A	333	335	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	C	189	192	anti-parallel
Strand 3	C	156	160	parallel
Strand 4	C	216	219	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	122	124	parallel
Strand 3	B	298	302	parallel
Strand 4	B	310	316	anti-parallel
Strand 5	B	324	327	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	D	189	193	anti-parallel
Strand 3	D	157	161	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	267	first strand
Strand 2	C	124	126	parallel
Strand 3	C	300	303	parallel
Strand 4	C	311	314	anti-parallel
Strand 5	C	324	326	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	271	first strand
Strand 2	C	284	286	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	330	first strand
Strand 2	C	333	335	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	D	298	304	parallel
Strand 3	D	309	316	anti-parallel
Strand 4	D	324	330	anti-parallel
Strand 5	D	333	335	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	271	first strand
Strand 2	D	284	286	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UI9

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UI9