Analysis of interatomic Contacts of Structural Units in PDB entry:
9UIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UIH entry

There are 6 chains in PDB entry 9UIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 1	ARG 439
B	SER 1	ILE 418
C	PHE 1	ARG 439
D	SER 1	ILE 418
E	PHE 1	ARG 439
F	SER 1	ILE 418

There are 34 helices in PDB entry 9UIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	112	116	Right-handed 310
Helix 2	AA2	A	238	246	Right-handed alpha
Helix 3	AA3	A	250	255	Right-handed alpha
Helix 4	AA4	A	283	287	Right-handed 310
Helix 5	AA5	A	403	439	Right-handed alpha
Helix 6	AA6	B	5	9	Right-handed 310
Helix 7	AA7	B	176	180	Right-handed 310
Helix 8	AA8	B	351	363	Right-handed alpha
Helix 9	AA9	B	363	398	Right-handed alpha
Helix 10	AB1	B	409	414	Right-handed alpha
Helix 11	AB2	C	112	116	Right-handed 310
Helix 12	AB3	C	238	246	Right-handed alpha
Helix 13	AB4	C	250	255	Right-handed alpha
Helix 14	AB5	C	397	402	Right-handed alpha
Helix 15	AB6	C	403	439	Right-handed alpha
Helix 16	AB7	D	5	9	Right-handed 310
Helix 17	AB8	D	176	180	Right-handed 310
Helix 18	AB9	D	222	224	Right-handed 310
Helix 19	AC1	D	351	363	Right-handed alpha
Helix 20	AC2	D	363	383	Right-handed alpha
Helix 21	AC3	D	384	398	Right-handed alpha
Helix 22	AC4	D	409	414	Right-handed alpha
Helix 23	AC5	E	112	116	Right-handed 310
Helix 24	AC6	E	238	246	Right-handed alpha
Helix 25	AC7	E	250	255	Right-handed alpha
Helix 26	AC8	E	256	259	Right-handed 310
Helix 27	AC9	E	403	439	Right-handed alpha
Helix 28	AD1	F	5	9	Right-handed 310
Helix 29	AD2	F	176	180	Right-handed 310
Helix 30	AD3	F	222	224	Right-handed 310
Helix 31	AD4	F	351	363	Right-handed alpha
Helix 32	AD5	F	363	383	Right-handed alpha
Helix 33	AD6	F	383	398	Right-handed alpha
Helix 34	AD7	F	409	414	Right-handed alpha

There are 66 sheets in PDB entry 9UIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	278	281	anti-parallel
Strand 3	A	161	163	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	8	first strand
Strand 2	A	275	276	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	27	31	anti-parallel
Strand 3	A	119	137	anti-parallel
Strand 4	A	176	180	anti-parallel
Strand 5	A	183	185	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	148	first strand
Strand 2	A	119	137	anti-parallel
Strand 3	A	33	48	anti-parallel
Strand 4	A	267	269	anti-parallel
Strand 5	A	260	262	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	101	110	anti-parallel
Strand 3	A	59	61	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	54	first strand
Strand 2	A	101	110	anti-parallel
Strand 3	A	74	81	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	91	92	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	204	first strand
Strand 2	A	214	215	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	221	first strand
Strand 2	A	233	234	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	303	first strand
Strand 2	A	316	322	anti-parallel
Strand 3	A	349	353	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	307	first strand
Strand 2	A	380	381	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	346	first strand
Strand 2	A	326	332	anti-parallel
Strand 3	A	366	369	anti-parallel
Strand 4	A	373	375	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	339	first strand
Strand 2	A	356	358	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	388	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	326	330	anti-parallel
Strand 4	B	282	299	anti-parallel
Strand 5	B	275	279	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	388	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	326	330	anti-parallel
Strand 4	B	282	299	anti-parallel
Strand 5	B	307	319	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	16	first strand
Strand 2	B	25	27	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	35	first strand
Strand 2	B	42	53	anti-parallel
Strand 3	B	59	67	anti-parallel
Strand 4	B	75	79	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	35	first strand
Strand 2	B	42	53	anti-parallel
Strand 3	B	92	104	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	86	first strand
Strand 2	B	111	115	anti-parallel
Strand 3	B	125	126	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	155	first strand
Strand 2	B	261	268	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	238	first strand
Strand 2	B	162	169	anti-parallel
Strand 3	B	253	258	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	211	first strand
Strand 2	B	197	202	anti-parallel
Strand 3	B	226	230	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	4	first strand
Strand 2	C	278	281	anti-parallel
Strand 3	C	162	163	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	8	first strand
Strand 2	C	275	276	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	19	first strand
Strand 2	C	27	40	anti-parallel
Strand 3	C	127	133	anti-parallel
Strand 4	C	144	148	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	19	first strand
Strand 2	C	27	40	anti-parallel
Strand 3	C	267	269	anti-parallel
Strand 4	C	260	262	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	48	first strand
Strand 2	C	119	123	anti-parallel
Strand 3	C	176	180	anti-parallel
Strand 4	C	183	185	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	101	110	anti-parallel
Strand 3	C	59	61	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	54	first strand
Strand 2	C	101	110	anti-parallel
Strand 3	C	77	81	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	C	91	92	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	137	first strand
Strand 2	C	140	141	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	204	first strand
Strand 2	C	214	215	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	220	221	first strand
Strand 2	C	233	234	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	354	first strand
Strand 2	C	314	327	anti-parallel
Strand 3	C	296	307	anti-parallel
Strand 4	C	380	381	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	330	332	first strand
Strand 2	C	367	369	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	338	339	first strand
Strand 2	C	356	357	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	387	388	first strand
Strand 2	D	336	340	anti-parallel
Strand 3	D	326	330	anti-parallel
Strand 4	D	293	299	anti-parallel
Strand 5	D	307	311	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	16	first strand
Strand 2	D	25	27	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	35	first strand
Strand 2	D	42	53	anti-parallel
Strand 3	D	59	67	anti-parallel
Strand 4	D	75	79	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	35	first strand
Strand 2	D	42	53	anti-parallel
Strand 3	D	92	104	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	86	first strand
Strand 2	D	108	115	anti-parallel
Strand 3	D	123	130	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	155	first strand
Strand 2	D	261	268	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	237	238	first strand
Strand 2	D	165	169	anti-parallel
Strand 3	D	251	256	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	211	first strand
Strand 2	D	197	202	anti-parallel
Strand 3	D	226	230	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	279	first strand
Strand 2	D	282	287	anti-parallel
Strand 3	D	315	319	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	4	first strand
Strand 2	E	278	281	anti-parallel
Strand 3	E	162	163	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	8	first strand
Strand 2	E	275	276	anti-parallel

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There are 5 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	19	first strand
Strand 2	E	27	31	anti-parallel
Strand 3	E	119	137	anti-parallel
Strand 4	E	176	180	anti-parallel
Strand 5	E	183	185	anti-parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	148	first strand
Strand 2	E	119	137	anti-parallel
Strand 3	E	33	48	anti-parallel
Strand 4	E	267	269	anti-parallel
Strand 5	E	260	262	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	101	110	anti-parallel
Strand 3	E	59	60	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	101	110	anti-parallel
Strand 3	E	74	82	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	91	92	anti-parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	203	204	first strand
Strand 2	E	214	215	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	220	221	first strand
Strand 2	E	233	234	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	302	first strand
Strand 2	E	315	322	anti-parallel
Strand 3	E	349	358	anti-parallel
Strand 4	E	337	339	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	326	327	first strand
Strand 2	E	345	346	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	330	332	first strand
Strand 2	E	366	369	anti-parallel
Strand 3	E	373	375	anti-parallel

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There are 5 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	387	388	first strand
Strand 2	F	336	340	anti-parallel
Strand 3	F	326	330	anti-parallel
Strand 4	F	282	298	anti-parallel
Strand 5	F	275	279	anti-parallel

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There are 5 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	387	388	first strand
Strand 2	F	336	340	anti-parallel
Strand 3	F	326	330	anti-parallel
Strand 4	F	282	298	anti-parallel
Strand 5	F	307	319	anti-parallel

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There are 4 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	3	first strand
Strand 2	F	251	258	parallel
Strand 3	F	162	169	anti-parallel
Strand 4	F	237	238	anti-parallel

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There are 2 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	16	first strand
Strand 2	F	25	27	anti-parallel

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There are 4 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	35	first strand
Strand 2	F	42	53	anti-parallel
Strand 3	F	59	67	anti-parallel
Strand 4	F	75	79	anti-parallel

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There are 3 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	35	first strand
Strand 2	F	42	53	anti-parallel
Strand 3	F	92	104	anti-parallel

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There are 3 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	83	86	first strand
Strand 2	F	108	115	anti-parallel
Strand 3	F	122	130	anti-parallel

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There are 2 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	155	first strand
Strand 2	F	261	268	anti-parallel

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There are 3 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	211	first strand
Strand 2	F	197	202	anti-parallel
Strand 3	F	226	230	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UIH