Analysis of interatomic Contacts of Structural Units in PDB entry:
9UJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UJU entry

There are 5 chains in PDB entry 9UJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 G 1 C 48
D
 G 1 C 48
C
 ASP 520LEU 789
A
 ASP 520LEU 792
X
 ALA -138ALA -134
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9UJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
522 529Right-handed alpha
Helix 2
AA2
C
535 553Right-handed alpha
Helix 3
AA3
C
594 599Right-handed alpha
Helix 4
AA4
C
601 607Right-handed alpha
Helix 5
AA5
C
618 630Right-handed alpha
Helix 6
AA6
C
639 651Right-handed alpha
Helix 7
AA7
C
654 658Right-handed 310
Helix 8
AA8
C
662 670Right-handed alpha
Helix 9
AA9
C
677 679Right-handed 310
Helix 10
AB1
C
680 688Right-handed alpha
Helix 11
AB2
C
690 694Right-handed 310
Helix 12
AB3
C
698 714Right-handed alpha
Helix 13
AB4
C
717 725Right-handed alpha
Helix 14
AB5
C
726 728Right-handed 310
Helix 15
AB6
C
729 743Right-handed alpha
Helix 16
AB7
C
746 771Right-handed alpha
Helix 17
AB8
C
780 789Right-handed alpha
Helix 18
AB9
A
522 528Right-handed alpha
Helix 19
AC1
A
535 553Right-handed alpha
Helix 20
AC2
A
593 597Right-handed 310
Helix 21
AC3
A
601 608Right-handed alpha
Helix 22
AC4
A
617 629Right-handed alpha
Helix 23
AC5
A
639 651Right-handed alpha
Helix 24
AC6
A
654 658Right-handed 310
Helix 25
AC7
A
662 670Right-handed alpha
Helix 26
AC8
A
677 679Right-handed 310
Helix 27
AC9
A
680 688Right-handed alpha
Helix 28
AD1
A
690 694Right-handed 310
Helix 29
AD2
A
698 714Right-handed alpha
Helix 30
AD3
A
714 725Right-handed alpha
Helix 31
AD4
A
726 728Right-handed 310
Helix 32
AD5
A
729 743Right-handed alpha
Helix 33
AD6
A
746 769Right-handed alpha
Helix 34
AD7
A
780 789Right-handed alpha
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There are 2 sheets in PDB entry 9UJU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
530 533first strand
Strand 2
C
585 589parallel
Strand 3
C
572 579anti-parallel
Strand 4
C
556 565anti-parallel
Strand 5
C
611 615parallel
Strand 6
C
636 638parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 533first strand
Strand 2
A
585 589parallel
Strand 3
A
572 580anti-parallel
Strand 4
A
556 565anti-parallel
Strand 5
A
611 615parallel
Strand 6
A
636 638parallel
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