Analysis of interatomic Contacts of Structural Units in PDB entry:
9UJX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UJX entry

There are 12 chains in PDB entry 9UJX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 9	PRO 319
B	ILE 8	GLY 315
C	ILE 8	GLY 315
D	ILE 8	GLY 315
E	ILE 8	GLY 315
F	ASN 10	VAL 316
a	ALA 9	PRO 319
b	ILE 8	GLY 315
c	ILE 8	GLY 315
d	ILE 8	GLY 315
e	ILE 8	GLY 315
f	ASN 10	GLY 315

There are148 helices in PDB entry 9UJX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	23	Right-handed alpha
Helix 2	AA2	A	53	64	Right-handed alpha
Helix 3	AA3	A	76	88	Right-handed alpha
Helix 4	AA4	A	102	107	Right-handed alpha
Helix 5	AA5	A	126	133	Right-handed alpha
Helix 6	AA6	A	153	160	Right-handed alpha
Helix 7	AA7	A	205	210	Right-handed alpha
Helix 8	AA8	A	221	232	Right-handed alpha
Helix 9	AA9	A	238	261	Right-handed alpha
Helix 10	AB1	A	269	284	Right-handed alpha
Helix 11	AB2	A	286	294	Right-handed alpha
Helix 12	AB3	A	302	315	Right-handed alpha
Helix 13	AB4	B	50	64	Right-handed alpha
Helix 14	AB5	B	76	88	Right-handed alpha
Helix 15	AB6	B	102	107	Right-handed alpha
Helix 16	AB7	B	126	133	Right-handed alpha
Helix 17	AB8	B	152	160	Right-handed alpha
Helix 18	AB9	B	205	211	Right-handed alpha
Helix 19	AC1	B	221	233	Right-handed alpha
Helix 20	AC2	B	239	261	Right-handed alpha
Helix 21	AC3	B	271	284	Right-handed alpha
Helix 22	AC4	B	285	294	Right-handed alpha
Helix 23	AC5	B	299	315	Right-handed alpha
Helix 24	AC6	C	50	64	Right-handed alpha
Helix 25	AC7	C	78	88	Right-handed alpha
Helix 26	AC8	C	102	107	Right-handed alpha
Helix 27	AC9	C	126	134	Right-handed alpha
Helix 28	AD1	C	147	159	Right-handed alpha
Helix 29	AD2	C	205	211	Right-handed alpha
Helix 30	AD3	C	221	231	Right-handed alpha
Helix 31	AD4	C	238	262	Right-handed alpha
Helix 32	AD5	C	269	284	Right-handed alpha
Helix 33	AD6	C	286	294	Right-handed alpha
Helix 34	AD7	C	299	314	Right-handed alpha
Helix 35	AD8	D	18	22	Right-handed alpha
Helix 36	AD9	D	50	63	Right-handed alpha
Helix 37	AE1	D	76	89	Right-handed alpha
Helix 38	AE2	D	126	134	Right-handed alpha
Helix 39	AE3	D	152	159	Right-handed alpha
Helix 40	AE4	D	206	211	Right-handed alpha
Helix 41	AE5	D	221	232	Right-handed alpha
Helix 42	AE6	D	233	237	Right-handed 310
Helix 43	AE7	D	238	262	Right-handed alpha
Helix 44	AE8	D	269	284	Right-handed alpha
Helix 45	AE9	D	287	294	Right-handed alpha
Helix 46	AF1	D	299	315	Right-handed alpha
Helix 47	AF2	E	18	23	Right-handed alpha
Helix 48	AF3	E	50	63	Right-handed alpha
Helix 49	AF4	E	77	89	Right-handed alpha
Helix 50	AF5	E	102	107	Right-handed alpha
Helix 51	AF6	E	126	134	Right-handed alpha
Helix 52	AF7	E	150	160	Right-handed alpha
Helix 53	AF8	E	204	211	Right-handed alpha
Helix 54	AF9	E	221	231	Right-handed alpha
Helix 55	AG1	E	241	262	Right-handed alpha
Helix 56	AG2	E	269	284	Right-handed alpha
Helix 57	AG3	E	286	295	Right-handed alpha
Helix 58	AG4	E	302	315	Right-handed alpha
Helix 59	AG5	F	18	23	Right-handed alpha
Helix 60	AG6	F	56	63	Right-handed alpha
Helix 61	AG7	F	78	88	Right-handed alpha
Helix 62	AG8	F	102	108	Right-handed alpha
Helix 63	AG9	F	126	133	Right-handed alpha
Helix 64	AH1	F	149	160	Right-handed alpha
Helix 65	AH2	F	221	232	Right-handed alpha
Helix 66	AH3	F	233	237	Right-handed 310
Helix 67	AH4	F	238	240	Right-handed 310
Helix 68	AH5	F	241	261	Right-handed alpha
Helix 69	AH6	F	269	284	Right-handed alpha
Helix 70	AH7	F	285	292	Right-handed alpha
Helix 71	AH8	F	294	298	Right-handed 310
Helix 72	AH9	F	302	314	Right-handed alpha
Helix 73	AI1	a	18	23	Right-handed alpha
Helix 74	AI2	a	53	64	Right-handed alpha
Helix 75	AI3	a	76	88	Right-handed alpha
Helix 76	AI4	a	102	107	Right-handed alpha
Helix 77	AI5	a	126	133	Right-handed alpha
Helix 78	AI6	a	142	146	Right-handed 310
Helix 79	AI7	a	153	160	Right-handed alpha
Helix 80	AI8	a	205	210	Right-handed alpha
Helix 81	AI9	a	221	233	Right-handed alpha
Helix 82	AJ1	a	238	261	Right-handed alpha
Helix 83	AJ2	a	269	284	Right-handed alpha
Helix 84	AJ3	a	286	294	Right-handed alpha
Helix 85	AJ4	a	299	301	Right-handed 310
Helix 86	AJ5	a	302	315	Right-handed alpha
Helix 87	AJ6	b	18	23	Right-handed alpha
Helix 88	AJ7	b	50	63	Right-handed alpha
Helix 89	AJ8	b	76	88	Right-handed alpha
Helix 90	AJ9	b	102	107	Right-handed alpha
Helix 91	AK1	b	126	133	Right-handed alpha
Helix 92	AK2	b	152	160	Right-handed alpha
Helix 93	AK3	b	205	211	Right-handed alpha
Helix 94	AK4	b	221	233	Right-handed alpha
Helix 95	AK5	b	234	237	Right-handed 310
Helix 96	AK6	b	238	262	Right-handed alpha
Helix 97	AK7	b	271	284	Right-handed alpha
Helix 98	AK8	b	285	294	Right-handed alpha
Helix 99	AK9	b	299	315	Right-handed alpha
Helix 100	AL1	c	18	23	Right-handed alpha
Helix 101	AL2	c	50	64	Right-handed alpha
Helix 102	AL3	c	76	88	Right-handed alpha
Helix 103	AL4	c	102	107	Right-handed alpha
Helix 104	AL5	c	126	134	Right-handed alpha
Helix 105	AL6	c	147	159	Right-handed alpha
Helix 106	AL7	c	204	209	Right-handed alpha
Helix 107	AL8	c	221	232	Right-handed alpha
Helix 108	AL9	c	238	261	Right-handed alpha
Helix 109	AM1	c	269	284	Right-handed alpha
Helix 110	AM2	c	288	294	Right-handed alpha
Helix 111	AM3	c	302	314	Right-handed alpha
Helix 112	AM4	d	18	23	Right-handed alpha
Helix 113	AM5	d	50	63	Right-handed alpha
Helix 114	AM6	d	76	89	Right-handed alpha
Helix 115	AM7	d	126	134	Right-handed alpha
Helix 116	AM8	d	152	159	Right-handed alpha
Helix 117	AM9	d	207	211	Right-handed 310
Helix 118	AN1	d	221	232	Right-handed alpha
Helix 119	AN2	d	233	237	Right-handed 310
Helix 120	AN3	d	238	261	Right-handed alpha
Helix 121	AN4	d	269	284	Right-handed alpha
Helix 122	AN5	d	285	292	Right-handed alpha
Helix 123	AN6	d	294	298	Right-handed 310
Helix 124	AN7	d	299	315	Right-handed alpha
Helix 125	AN8	e	18	23	Right-handed alpha
Helix 126	AN9	e	50	64	Right-handed alpha
Helix 127	AO1	e	77	88	Right-handed alpha
Helix 128	AO2	e	102	107	Right-handed alpha
Helix 129	AO3	e	126	134	Right-handed alpha
Helix 130	AO4	e	150	160	Right-handed alpha
Helix 131	AO5	e	221	231	Right-handed alpha
Helix 132	AO6	e	239	262	Right-handed alpha
Helix 133	AO7	e	269	284	Right-handed alpha
Helix 134	AO8	e	286	295	Right-handed alpha
Helix 135	AO9	e	302	315	Right-handed alpha
Helix 136	AP1	f	18	23	Right-handed alpha
Helix 137	AP2	f	56	64	Right-handed alpha
Helix 138	AP3	f	76	88	Right-handed alpha
Helix 139	AP4	f	102	108	Right-handed alpha
Helix 140	AP5	f	126	134	Right-handed alpha
Helix 141	AP6	f	149	160	Right-handed alpha
Helix 142	AP7	f	221	232	Right-handed alpha
Helix 143	AP8	f	233	237	Right-handed 310
Helix 144	AP9	f	241	261	Right-handed alpha
Helix 145	AQ1	f	269	283	Right-handed alpha
Helix 146	AQ2	f	285	292	Right-handed alpha
Helix 147	AQ3	f	294	298	Right-handed 310
Helix 148	AQ4	f	299	314	Right-handed alpha

There are 36 sheets in PDB entry 9UJX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	17	first strand
Strand 2	A	29	32	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	96	first strand
Strand 2	A	137	141	parallel
Strand 3	A	180	185	parallel
Strand 4	A	67	70	parallel
Strand 5	A	213	216	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	115	first strand
Strand 2	A	118	125	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	17	first strand
Strand 2	B	29	32	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	96	first strand
Strand 2	B	137	141	parallel
Strand 3	B	180	185	parallel
Strand 4	B	67	71	parallel
Strand 5	B	213	217	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	112	first strand
Strand 2	B	121	125	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	15	first strand
Strand 2	C	31	32	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	96	first strand
Strand 2	C	137	141	parallel
Strand 3	C	180	184	parallel
Strand 4	C	67	70	parallel
Strand 5	C	213	216	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	114	first strand
Strand 2	C	119	125	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	17	first strand
Strand 2	D	29	32	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	96	first strand
Strand 2	D	137	141	parallel
Strand 3	D	180	184	parallel
Strand 4	D	66	71	parallel
Strand 5	D	213	217	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	115	first strand
Strand 2	D	118	125	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	17	first strand
Strand 2	E	29	32	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	96	first strand
Strand 2	E	137	141	parallel
Strand 3	E	181	185	parallel
Strand 4	E	67	70	parallel
Strand 5	E	213	216	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	115	first strand
Strand 2	E	118	125	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	17	first strand
Strand 2	F	29	32	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	92	96	first strand
Strand 2	F	137	141	parallel
Strand 3	F	181	185	parallel
Strand 4	F	67	70	parallel
Strand 5	F	213	216	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	14	17	first strand
Strand 2	a	29	32	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	92	96	first strand
Strand 2	a	137	141	parallel
Strand 3	a	180	185	parallel
Strand 4	a	67	70	parallel
Strand 5	a	213	216	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	108	109	first strand
Strand 2	a	124	125	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	112	114	first strand
Strand 2	a	119	121	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	14	17	first strand
Strand 2	b	29	32	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	92	96	first strand
Strand 2	b	137	141	parallel
Strand 3	b	180	185	parallel
Strand 4	b	67	70	parallel
Strand 5	b	213	216	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	108	112	first strand
Strand 2	b	121	125	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	14	17	first strand
Strand 2	c	29	32	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	92	96	first strand
Strand 2	c	137	141	parallel
Strand 3	c	181	184	parallel
Strand 4	c	67	70	parallel
Strand 5	c	213	216	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	108	112	first strand
Strand 2	c	121	125	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	14	17	first strand
Strand 2	d	29	32	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	92	96	first strand
Strand 2	d	137	141	parallel
Strand 3	d	180	184	parallel
Strand 4	d	66	71	parallel
Strand 5	d	213	217	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	108	112	first strand
Strand 2	d	121	125	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	14	17	first strand
Strand 2	e	29	32	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	92	96	first strand
Strand 2	e	137	141	parallel
Strand 3	e	181	184	parallel
Strand 4	e	67	70	parallel
Strand 5	e	213	216	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	108	110	first strand
Strand 2	e	123	125	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	113	115	first strand
Strand 2	e	118	120	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	14	17	first strand
Strand 2	f	29	32	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	92	96	first strand
Strand 2	f	137	141	parallel
Strand 3	f	181	185	parallel
Strand 4	f	67	70	parallel
Strand 5	f	213	216	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UJX

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UJX