Analysis of interatomic Contacts of Structural Units in PDB entry:
9UJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UJY entry

There is 1 chain in PDB entry 9UJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 19VAL 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9UJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 48Right-handed alpha
Helix 2
AA2
A
58 67Right-handed alpha
Helix 3
AA3
A
68 70Right-handed 310
Helix 4
AA4
A
82 89Right-handed alpha
Helix 5
AA5
A
98 104Right-handed alpha
Helix 6
AA6
A
106 112Right-handed alpha
Helix 7
AA7
A
147 157Right-handed alpha
Helix 8
AA8
A
169 172Right-handed 310
Helix 9
AA9
A
173 180Right-handed alpha
Helix 10
AB1
A
201 217Right-handed alpha
Helix 11
AB2
A
225 235Right-handed alpha
Helix 12
AB3
A
244 246Right-handed 310
Helix 13
AB4
A
247 255Right-handed alpha
Helix 14
AB5
A
288 299Right-handed alpha
Helix 15
AB6
A
302 313Right-handed alpha
Helix 16
AB7
A
320 328Right-handed alpha
Helix 17
AB8
A
330 343Right-handed alpha
Helix 18
AB9
A
351 369Right-handed alpha
Helix 19
AC1
A
372 381Right-handed alpha
Helix 20
AC2
A
382 410Right-handed alpha
Helix 21
AC3
A
418 426Right-handed alpha
Helix 22
AC4
A
431 438Right-handed alpha
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There are 5 sheets in PDB entry 9UJY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
21 26parallel
Strand 3
A
75 79parallel
Strand 4
A
274 282anti-parallel
Strand 5
A
122 127anti-parallel
Strand 6
A
317 318anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
21 26parallel
Strand 3
A
75 79parallel
Strand 4
A
274 282anti-parallel
Strand 5
A
344 345parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
118 119anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
238 243parallel
Strand 3
A
130 134anti-parallel
Strand 4
A
258 261anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
191 197anti-parallel
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