Analysis of interatomic Contacts of Structural Units in PDB entry:
9UK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UK9 entry

There is 1 chain in PDB entry 9UK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 173LEU 1255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9UK9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
186 193Right-handed alpha
Helix 2
AA2
A
208 214Right-handed alpha
Helix 3
AA3
A
216 230Right-handed alpha
Helix 4
AA4
A
243 257Right-handed alpha
Helix 5
AA5
A
282 286Right-handed 310
Helix 6
AA6
A
357 374Right-handed alpha
Helix 7
AA7
A
402 417Right-handed alpha
Helix 8
AA8
A
427 436Right-handed alpha
Helix 9
AA9
A
454 464Right-handed alpha
Helix 10
AB1
A
466 478Right-handed alpha
Helix 11
AB2
A
529 541Right-handed alpha
Helix 12
AB3
A
571 578Right-handed alpha
Helix 13
AB4
A
590 601Right-handed alpha
Helix 14
AB5
A
620 631Right-handed alpha
Helix 15
AB6
A
639 658Right-handed alpha
Helix 16
AB7
A
659 664Right-handed alpha
Helix 17
AB8
A
670 688Right-handed alpha
Helix 18
AB9
A
702 716Right-handed alpha
Helix 19
AC1
A
727 731Right-handed 310
Helix 20
AC2
A
732 741Right-handed alpha
Helix 21
AC3
A
763 767Right-handed 310
Helix 22
AC4
A
776 790Right-handed alpha
Helix 23
AC5
A
802 815Right-handed alpha
Helix 24
AC6
A
815 835Right-handed alpha
Helix 25
AC7
A
847 851Right-handed 310
Helix 26
AC8
A
872 892Right-handed alpha
Helix 27
AC9
A
906 914Right-handed alpha
Helix 28
AD1
A
915 925Right-handed alpha
Helix 29
AD2
A
945 950Right-handed alpha
Helix 30
AD3
A
961 968Right-handed alpha
Helix 31
AD4
A
968 985Right-handed alpha
Helix 32
AD5
A
992 1008Right-handed alpha
Helix 33
AD6
A
1011 1020Right-handed alpha
Helix 34
AD7
A
1034 1042Right-handed alpha
Helix 35
AD8
A
1046 1059Right-handed alpha
Helix 36
AD9
A
1071 1079Right-handed alpha
Helix 37
AE1
A
1100 1118Right-handed alpha
Helix 38
AE2
A
1139 1148Right-handed alpha
Helix 39
AE3
A
1153 1162Right-handed alpha
Helix 40
AE4
A
1165 1185Right-handed alpha
Helix 41
AE5
A
1189 1201Right-handed alpha
Helix 42
AE6
A
1203 1214Right-handed alpha
Helix 43
AE7
A
1214 1231Right-handed alpha
Helix 44
AE8
A
1238 1255Right-handed alpha
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There are 6 sheets in PDB entry 9UK9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
175 179anti-parallel
Strand 3
A
232 238anti-parallel
Strand 4
A
201 207parallel
Strand 5
A
261 264parallel
Strand 6
A
288 291parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 507first strand
Strand 2
A
382 385parallel
Strand 3
A
548 550parallel
Strand 4
A
582 587parallel
Strand 5
A
604 608parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 487first strand
Strand 2
A
492 493anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 615first strand
Strand 2
A
689 691anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1060 1062first strand
Strand 2
A
1023 1025anti-parallel
Strand 3
A
955 960parallel
Strand 4
A
900 905parallel
Strand 5
A
1084 1089parallel
Strand 6
A
1122 1127parallel
Strand 7
A
1135 1138anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
927 932first strand
Strand 2
A
937 943anti-parallel
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