Analysis of interatomic Contacts of Structural Units in PDB entry:
9UL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9UL6 entry

There are 3 chains in PDB entry 9UL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLU 422ASP 552
A
 GLU 422ASP 552
B
 GLU 422ASP 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 9UL6

There are 8 sheets in PDB entry 9UL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
479 482first strand
Strand 2
C
468 472anti-parallel
Strand 3
C
525 531anti-parallel
Strand 4
C
537 549anti-parallel
Strand 5
C
424 436anti-parallel
Strand 6
B
424 436anti-parallel
Strand 7
B
537 549anti-parallel
Strand 8
B
525 531anti-parallel
Strand 9
B
468 473anti-parallel
Strand 10
B
479 482anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
440 445first strand
Strand 2
C
451 456anti-parallel
Strand 3
C
494 499anti-parallel
Strand 4
C
511 514parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
462 463first strand
Strand 2
C
488 489anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
426 436first strand
Strand 2
A
537 549anti-parallel
Strand 3
A
525 531anti-parallel
Strand 4
A
468 472anti-parallel
Strand 5
A
479 482anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 445first strand
Strand 2
A
451 456anti-parallel
Strand 3
A
494 499anti-parallel
Strand 4
A
511 514parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 463first strand
Strand 2
A
488 489anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
440 445first strand
Strand 2
B
451 456anti-parallel
Strand 3
B
494 499anti-parallel
Strand 4
B
511 514parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
462 463first strand
Strand 2
B
488 489anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il