Analysis of interatomic Contacts of Structural Units in PDB entry:
9ULW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ULW entry

There are 2 chains in PDB entry 9ULW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 376
B
 MET 1THR 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9ULW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 12Right-handed alpha
Helix 2
AA2
A
12 24Right-handed alpha
Helix 3
AA3
A
39 49Right-handed alpha
Helix 4
AA4
A
70 93Right-handed alpha
Helix 5
AA5
A
95 104Right-handed alpha
Helix 6
AA6
A
111 127Right-handed alpha
Helix 7
AA7
A
133 146Right-handed alpha
Helix 8
AA8
A
157 180Right-handed alpha
Helix 9
AA9
A
187 194Right-handed alpha
Helix 10
AB1
A
201 218Right-handed alpha
Helix 11
AB2
A
218 234Right-handed alpha
Helix 12
AB3
A
235 240Right-handed 310
Helix 13
AB4
A
241 253Right-handed alpha
Helix 14
AB5
A
284 290Right-handed alpha
Helix 15
AB6
A
302 315Right-handed 310
Helix 16
AB7
A
320 324Right-handed 310
Helix 17
AB8
A
327 345Right-handed alpha
Helix 18
AB9
B
6 12Right-handed alpha
Helix 19
AC1
B
12 23Right-handed alpha
Helix 20
AC2
B
39 49Right-handed alpha
Helix 21
AC3
B
50 53Right-handed 310
Helix 22
AC4
B
70 93Right-handed alpha
Helix 23
AC5
B
95 104Right-handed alpha
Helix 24
AC6
B
111 127Right-handed alpha
Helix 25
AC7
B
133 147Right-handed alpha
Helix 26
AC8
B
158 180Right-handed alpha
Helix 27
AC9
B
187 194Right-handed alpha
Helix 28
AD1
B
201 218Right-handed alpha
Helix 29
AD2
B
218 234Right-handed alpha
Helix 30
AD3
B
235 240Right-handed 310
Helix 31
AD4
B
241 253Right-handed alpha
Helix 32
AD5
B
284 290Right-handed alpha
Helix 33
AD6
B
302 314Right-handed 310
Helix 34
AD7
B
327 345Right-handed alpha
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There are 6 sheets in PDB entry 9ULW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
34 37anti-parallel
Strand 3
A
280 282parallel
Strand 4
A
260 261anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
368 374anti-parallel
Strand 3
A
346 352anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
274 275anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 30first strand
Strand 2
B
34 37anti-parallel
Strand 3
B
280 282parallel
Strand 4
B
260 261anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
368 374anti-parallel
Strand 3
B
346 352anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 268first strand
Strand 2
B
274 275anti-parallel
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