Analysis of interatomic Contacts of Structural Units in PDB entry:
9UNP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9UNP entry

There are 4 chains in PDB entry 9UNP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 36	ARG 844
B	ASN 35	HIS 839
C	PRO 24	ALA 843
D	ALA 32	PHE 842

There are109 helices in PDB entry 9UNP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	53	Right-handed alpha
Helix 2	AA2	A	71	82	Right-handed alpha
Helix 3	AA3	A	103	113	Right-handed alpha
Helix 4	AA4	A	143	145	Right-handed 310
Helix 5	AA5	A	146	158	Right-handed alpha
Helix 6	AA6	A	170	187	Right-handed alpha
Helix 7	AA7	A	204	214	Right-handed alpha
Helix 8	AA8	A	224	238	Right-handed alpha
Helix 9	AA9	A	251	254	Right-handed 310
Helix 10	AB1	A	255	261	Right-handed alpha
Helix 11	AB2	A	276	298	Right-handed alpha
Helix 12	AB3	A	316	328	Right-handed alpha
Helix 13	AB4	A	381	385	Right-handed 310
Helix 14	AB5	A	458	470	Right-handed alpha
Helix 15	AB6	A	500	507	Right-handed alpha
Helix 16	AB7	A	520	525	Right-handed alpha
Helix 17	AB8	A	550	556	Right-handed alpha
Helix 18	AB9	A	559	584	Right-handed alpha
Helix 19	AC1	A	602	615	Right-handed alpha
Helix 20	AC2	A	626	657	Right-handed alpha
Helix 21	AC3	A	669	674	Right-handed alpha
Helix 22	AC4	A	687	696	Right-handed alpha
Helix 23	AC5	A	699	709	Right-handed alpha
Helix 24	AC6	A	713	723	Right-handed alpha
Helix 25	AC7	A	733	743	Right-handed alpha
Helix 26	AC8	A	768	782	Right-handed alpha
Helix 27	AC9	A	783	792	Right-handed alpha
Helix 28	AD1	A	811	844	Right-handed alpha
Helix 29	AD2	B	50	55	Right-handed alpha
Helix 30	AD3	B	78	92	Right-handed alpha
Helix 31	AD4	B	106	120	Right-handed alpha
Helix 32	AD5	B	150	166	Right-handed alpha
Helix 33	AD6	B	179	194	Right-handed alpha
Helix 34	AD7	B	211	222	Right-handed alpha
Helix 35	AD8	B	232	246	Right-handed alpha
Helix 36	AD9	B	258	263	Right-handed alpha
Helix 37	AE1	B	282	287	Right-handed alpha
Helix 38	AE2	B	289	309	Right-handed alpha
Helix 39	AE3	B	335	340	Right-handed alpha
Helix 40	AE4	B	458	472	Right-handed alpha
Helix 41	AE5	B	495	502	Right-handed alpha
Helix 42	AE6	B	515	522	Right-handed alpha
Helix 43	AE7	B	556	580	Right-handed alpha
Helix 44	AE8	B	599	613	Right-handed alpha
Helix 45	AE9	B	624	655	Right-handed alpha
Helix 46	AF1	B	667	672	Right-handed alpha
Helix 47	AF2	B	688	698	Right-handed alpha
Helix 48	AF3	B	698	706	Right-handed alpha
Helix 49	AF4	B	707	709	Right-handed 310
Helix 50	AF5	B	712	722	Right-handed alpha
Helix 51	AF6	B	732	742	Right-handed alpha
Helix 52	AF7	B	743	745	Right-handed 310
Helix 53	AF8	B	770	785	Right-handed alpha
Helix 54	AF9	B	786	796	Right-handed alpha
Helix 55	AG1	B	798	802	Right-handed 310
Helix 56	AG2	B	818	837	Right-handed alpha
Helix 57	AG3	C	35	54	Right-handed alpha
Helix 58	AG4	C	70	82	Right-handed alpha
Helix 59	AG5	C	83	85	Right-handed 310
Helix 60	AG6	C	103	114	Right-handed alpha
Helix 61	AG7	C	125	130	Right-handed 310
Helix 62	AG8	C	143	145	Right-handed 310
Helix 63	AG9	C	146	157	Right-handed alpha
Helix 64	AH1	C	170	187	Right-handed alpha
Helix 65	AH2	C	205	214	Right-handed alpha
Helix 66	AH3	C	224	238	Right-handed alpha
Helix 67	AH4	C	256	261	Right-handed alpha
Helix 68	AH5	C	276	296	Right-handed alpha
Helix 69	AH6	C	317	328	Right-handed alpha
Helix 70	AH7	C	381	385	Right-handed 310
Helix 71	AH8	C	457	470	Right-handed alpha
Helix 72	AH9	C	500	507	Right-handed alpha
Helix 73	AI1	C	559	581	Right-handed alpha
Helix 74	AI2	C	602	616	Right-handed alpha
Helix 75	AI3	C	629	658	Right-handed alpha
Helix 76	AI4	C	669	674	Right-handed alpha
Helix 77	AI5	C	687	696	Right-handed alpha
Helix 78	AI6	C	699	709	Right-handed alpha
Helix 79	AI7	C	713	723	Right-handed alpha
Helix 80	AI8	C	733	743	Right-handed alpha
Helix 81	AI9	C	768	782	Right-handed alpha
Helix 82	AJ1	C	783	793	Right-handed alpha
Helix 83	AJ2	C	810	843	Right-handed alpha
Helix 84	AJ3	D	43	46	Right-handed 310
Helix 85	AJ4	D	47	57	Right-handed alpha
Helix 86	AJ5	D	78	92	Right-handed alpha
Helix 87	AJ6	D	105	120	Right-handed alpha
Helix 88	AJ7	D	149	165	Right-handed alpha
Helix 89	AJ8	D	179	191	Right-handed alpha
Helix 90	AJ9	D	212	222	Right-handed alpha
Helix 91	AK1	D	233	248	Right-handed alpha
Helix 92	AK2	D	260	264	Right-handed alpha
Helix 93	AK3	D	288	311	Right-handed alpha
Helix 94	AK4	D	328	341	Right-handed alpha
Helix 95	AK5	D	459	473	Right-handed alpha
Helix 96	AK6	D	496	503	Right-handed alpha
Helix 97	AK7	D	516	523	Right-handed alpha
Helix 98	AK8	D	561	581	Right-handed alpha
Helix 99	AK9	D	601	614	Right-handed alpha
Helix 100	AL1	D	625	656	Right-handed alpha
Helix 101	AL2	D	689	699	Right-handed alpha
Helix 102	AL3	D	699	706	Right-handed alpha
Helix 103	AL4	D	713	723	Right-handed alpha
Helix 104	AL5	D	733	743	Right-handed alpha
Helix 105	AL6	D	744	747	Right-handed 310
Helix 106	AL7	D	771	786	Right-handed alpha
Helix 107	AL8	D	787	797	Right-handed alpha
Helix 108	AL9	D	814	817	Right-handed 310
Helix 109	AM1	D	818	842	Right-handed alpha

There are 33 sheets in PDB entry 9UNP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	118	120	parallel
Strand 3	A	137	139	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	197	first strand
Strand 2	A	164	168	parallel
Strand 3	A	219	222	parallel
Strand 4	A	247	248	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	367	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	346	347	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	477	first strand
Strand 2	A	397	401	parallel
Strand 3	A	512	513	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	412	first strand
Strand 2	A	450	457	anti-parallel
Strand 3	A	433	439	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	489	first strand
Strand 2	A	496	499	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	761	762	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	538	543	anti-parallel
Strand 4	A	746	753	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	126	first strand
Strand 2	B	144	146	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	203	first strand
Strand 2	B	169	172	parallel
Strand 3	B	226	228	parallel
Strand 4	B	254	257	parallel
Strand 5	B	276	280	parallel
Strand 6	B	362	367	anti-parallel
Strand 7	B	371	376	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	379	first strand
Strand 2	B	382	383	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	479	first strand
Strand 2	B	406	410	parallel
Strand 3	B	507	508	parallel
Strand 4	B	764	765	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	421	first strand
Strand 2	B	449	457	anti-parallel
Strand 3	B	434	441	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	684	first strand
Strand 2	B	727	731	parallel
Strand 3	B	529	538	anti-parallel
Strand 4	B	747	749	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	684	first strand
Strand 2	B	727	731	parallel
Strand 3	B	529	538	anti-parallel
Strand 4	B	756	761	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	64	first strand
Strand 2	C	26	31	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	138	139	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	197	first strand
Strand 2	C	164	168	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	248	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	357	anti-parallel
Strand 3	C	360	367	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	330	first strand
Strand 2	C	338	339	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	746	762	anti-parallel
Strand 5	C	528	529	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	746	762	anti-parallel
Strand 5	C	534	543	anti-parallel
Strand 6	C	728	732	anti-parallel
Strand 7	C	681	682	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	412	first strand
Strand 2	C	450	456	anti-parallel
Strand 3	C	433	439	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	486	489	first strand
Strand 2	C	496	499	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	71	first strand
Strand 2	D	35	42	parallel
Strand 3	D	96	101	parallel
Strand 4	D	123	125	parallel
Strand 5	D	143	145	parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	204	first strand
Strand 2	D	168	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	259	parallel
Strand 5	D	277	282	parallel
Strand 6	D	362	368	anti-parallel
Strand 7	D	372	379	anti-parallel
Strand 8	D	384	385	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	D	347	348	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	406	410	first strand
Strand 2	D	476	480	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	419	first strand
Strand 2	D	457	458	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	438	440	first strand
Strand 2	D	451	453	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	490	first strand
Strand 2	D	493	495	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	729	732	first strand
Strand 2	D	531	538	anti-parallel
Strand 3	D	749	750	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	729	732	first strand
Strand 2	D	531	538	anti-parallel
Strand 3	D	757	761	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9UNP

Analysis of interatomic Contacts of Structural Units in PDB entry:
9UNP